Search Results - "Addala V"

89P Dissecting tumour-immune interactions in mesothelioma for identifying responders to immune checkpoint blockade.

Authors: Addala, V. Sneddon, S. Dick, I. et al.

Source: Annals of Oncology. 2020 Supplement 7, Vol. 31, pS1453-S1453. 1p.

115P Detection of actionable variants in various cancer types reveals value of whole-genome sequencing over in-silico whole-exome and hotspot panel sequencing.

Authors: Ramarao-Milne, K P Patch, A-M Nones, K et al.

Source: Annals of Oncology. 2019 Supplement, Vol. 30, pN.PAG-N.PAG. 1p.

Enhanced measures of neoantigenicity capture unique tumor-immune interactions across primary melanoma subtypes.

Authors: Shteinman ER Attrill GH Maher NG et al.

Source: Genome medicine [Genome Med] 2026 May 26; Vol. 18 (1). Date of Electronic Publication: 2026 May 26.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101475844 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-994X (Electronic) Linking ISSN: 1756994X NLM ISO Abbreviation: Genome Med Subsets: MEDLINE

Explainable machine learning identifies features and thresholds predictive of immunotherapy response.

Authors: Tran KA Addala V Koufariotis LT et al.

Source: Scientific reports [Sci Rep] 2026 May 23; Vol. 16 (1). Date of Electronic Publication: 2026 May 23.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

Germline variants alter immune surveillance.

Authors: Waddell N Addala V

Source: Science (New York, N.Y.) [Science] 2024 May 31; Vol. 384 (6699), pp. 961-962. Date of Electronic Publication: 2024 May 30.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Comment

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE

The oesophageal adenocarcinoma tumour immune microenvironment dictates outcomes with different modalities of neoadjuvant therapy - results from the AGITG DOCTOR trial and the cancer evolution biobank.

Authors: Lonie JM Brosda S Bonazzi VF et al.

Source: Frontiers in immunology [Front Immunol] 2023 Oct 12; Vol. 14, pp. 1220129. Date of Electronic Publication: 2023 Oct 12 (Print Publication: 2023).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE

Performance of tumour microenvironment deconvolution methods in breast cancer using single-cell simulated bulk mixtures.

Authors: Tran KA Addala V Johnston RL et al.

Source: Nature communications [Nat Commun] 2023 Sep 16; Vol. 14 (1), pp. 5758. Date of Electronic Publication: 2023 Sep 16.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Efficient detection and monitoring of pediatric brain malignancies with liquid biopsy based on patient-specific somatic mutation screening.

Authors: Kojic M Maybury MK Waddell N et al.

Source: Neuro-oncology [Neuro Oncol] 2023 Aug 03; Vol. 25 (8), pp. 1507-1517.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 100887420 Publication Model: Print Cited Medium: Internet ISSN: 1523-5866 (Electronic) Linking ISSN: 15228517 NLM ISO Abbreviation: Neuro Oncol Subsets: MEDLINE

Multiomic profiling of checkpoint inhibitor-treated melanoma: Identifying predictors of response and resistance, and markers of biological discordance.

Authors: Newell F Pires da Silva I Johansson PA et al.

Source: Cancer cell [Cancer Cell] 2025 Mar 10; Vol. 43 (3), pp. 563. Date of Electronic Publication: 2025 Feb 06.

Publication Type: Published Erratum

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101130617 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-3686 (Electronic) Linking ISSN: 15356108 NLM ISO Abbreviation: Cancer Cell Subsets: MEDLINE; PubMed not MEDLINE

Multi-omic features of oesophageal adenocarcinoma in patients treated with preoperative neoadjuvant therapy.

Authors: M Naeini M Newell F Aoude LG et al.

Source: Nature communications [Nat Commun] 2023 May 31; Vol. 14 (1), pp. 3155. Date of Electronic Publication: 2023 May 31.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Spatial intra-tumour heterogeneity and treatment-induced genomic evolution in oesophageal adenocarcinoma: implications for prognosis and therapy.

Authors: Brosda S Aoude LG Bonazzi VF et al.

Corporate Authors: Brosda S Aoude LG Bonazzi VF et al.

Source: Genome medicine [Genome Med] 2024 Jul 17; Vol. 16 (1), pp. 90. Date of Electronic Publication: 2024 Jul 17.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101475844 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-994X (Electronic) Linking ISSN: 1756994X NLM ISO Abbreviation: Genome Med Subsets: MEDLINE

Whole-genome sequencing of acral melanoma reveals genomic complexity and diversity.

Authors: Newell F Wilmott JS Johansson PA et al.

Source: Nature communications [Nat Commun] 2020 Oct 16; Vol. 11 (1), pp. 5259. Date of Electronic Publication: 2020 Oct 16.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Computational immunogenomic approaches to predict response to cancer immunotherapies.

Authors: Addala V Newell F Pearson JV et al.

Source: Nature reviews. Clinical oncology [Nat Rev Clin Oncol] 2024 Jan; Vol. 21 (1), pp. 28-46. Date of Electronic Publication: 2023 Oct 31.

Publication Type: Journal Article; Review

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101500077 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1759-4782 (Electronic) Linking ISSN: 17594774 NLM ISO Abbreviation: Nat Rev Clin Oncol Subsets: MEDLINE

Generalising uncertainty improves accuracy and safety of deep learning analytics applied to oncology.

Authors: MacDonald S Foley H Yap M et al.

Source: Scientific reports [Sci Rep] 2023 May 06; Vol. 13 (1), pp. 7395. Date of Electronic Publication: 2023 May 06.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

CD155 loss enhances tumor suppression via combined host and tumor-intrinsic mechanisms.

Authors: Li XY Das I Lepletier A et al.

Source: The Journal of clinical investigation [J Clin Invest] 2018 Jun 01; Vol. 128 (6), pp. 2613-2625. Date of Electronic Publication: 2018 May 14.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Retracted Publication

Journal Info: Publisher: American Society for Clinical Investigation Country of Publication: United States NLM ID: 7802877 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1558-8238 (Electronic) Linking ISSN: 00219738 NLM ISO Abbreviation: J Clin Invest Subsets: MEDLINE

Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing.

Authors: Patch AM Nones K Kazakoff SH et al.

Source: PloS one [PLoS One] 2018 Jan 10; Vol. 13 (1), pp. e0190264. Date of Electronic Publication: 2018 Jan 10 (Print Publication: 2018).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Comparison of actionable events detected in cancer genomes by whole-genome sequencing, in silico whole-exome and mutation panels.

Authors: Ramarao-Milne P Kondrashova O Patch AM et al.

Source: ESMO open [ESMO Open] 2022 Aug; Vol. 7 (4), pp. 100540. Date of Electronic Publication: 2022 Jul 15.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Country of Publication: England NLM ID: 101690685 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2059-7029 (Electronic) Linking ISSN: 20597029 NLM ISO Abbreviation: ESMO Open Subsets: MEDLINE

Comprehensive genomic and tumour immune profiling reveals potential therapeutic targets in malignant pleural mesothelioma.

Authors: Creaney J Patch AM Addala V et al.

Source: Genome medicine [Genome Med] 2022 May 30; Vol. 14 (1), pp. 58. Date of Electronic Publication: 2022 May 30.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101475844 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-994X (Electronic) Linking ISSN: 1756994X NLM ISO Abbreviation: Genome Med Subsets: MEDLINE

CD155 loss enhances tumor suppression via combined host and tumor-intrinsic mechanisms.

Authors: Li XY Das I Lepletier A et al.

Source: The Journal of clinical investigation [J Clin Invest] 2022 Mar 15; Vol. 132 (6).

Publication Type: Journal Article; Retraction Notice

Journal Info: Publisher: American Society for Clinical Investigation Country of Publication: United States NLM ID: 7802877 Publication Model: Print Cited Medium: Internet ISSN: 1558-8238 (Electronic) Linking ISSN: 00219738 NLM ISO Abbreviation: J Clin Invest Subsets: MEDLINE; PubMed not MEDLINE

Multiomic profiling of checkpoint inhibitor-treated melanoma: Identifying predictors of response and resistance, and markers of biological discordance.

Authors: Newell F Pires da Silva I Johansson PA et al.

Source: Cancer cell [Cancer Cell] 2022 Jan 10; Vol. 40 (1), pp. 88-102.e7. Date of Electronic Publication: 2021 Dec 23.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101130617 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-3686 (Electronic) Linking ISSN: 15356108 NLM ISO Abbreviation: Cancer Cell Subsets: MEDLINE