Search Results - "Beavan AJS"

PanForest: predicting genes in genomes using random forests.

Authors: Beavan AJS Domingo-Sananes MR McInerney JO

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2026 Jan 02; Vol. 42 (1).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

The Vertebrate Genomes Project Phase I: A global reference genome resource.

Authors: Formenti G Absolon DE Abueg LAL et al.

Corporate Authors: Formenti G Absolon DE Abueg LAL et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 Jun 25. Date of Electronic Publication: 2026 Jun 25.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Specialized ribosomes: integrating new insights and current challenges.

Authors: Beavan AJS Thuburn V Fatkhullin B et al.

Source: Philosophical transactions of the Royal Society of London. Series B, Biological sciences [Philos Trans R Soc Lond B Biol Sci] 2025 Mar 06; Vol. 380 (1921), pp. 20230377. Date of Electronic Publication: 2025 Mar 06.

Publication Type: Journal Article; Review

Journal Info: Publisher: Royal Society Country of Publication: England NLM ID: 7503623 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1471-2970 (Electronic) Linking ISSN: 09628436 NLM ISO Abbreviation: Philos Trans R Soc Lond B Biol Sci Subsets: MEDLINE

Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences.

Authors: Yu D Ren Y Uesaka M et al.

Source: Nature ecology & evolution [Nat Ecol Evol] 2024 Mar; Vol. 8 (3), pp. 519-535. Date of Electronic Publication: 2024 Jan 12.

Publication Type: Journal Article

Journal Info: Publisher: Springer Nature Country of Publication: England NLM ID: 101698577 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2397-334X (Electronic) Linking ISSN: 2397334X NLM ISO Abbreviation: Nat Ecol Evol Subsets: MEDLINE

Contingency, repeatability, and predictability in the evolution of a prokaryotic pangenome.

Authors: Beavan AJS Domingo-Sananes MR McInerney JO

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2024 Jan 02; Vol. 121 (1), pp. e2304934120. Date of Electronic Publication: 2023 Dec 26.

Publication Type: Journal Article

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

Performance of A Priori and A Posteriori Calibration Strategies in Divergence Time Estimation.

Authors: Beavan AJS Donoghue PCJ Beaumont MA et al.

Source: Genome biology and evolution [Genome Biol Evol] 2020 Jul 01; Vol. 12 (7), pp. 1087-1098.

Publication Type: Comparative Study; Evaluation Study; Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

Gene essentiality evolves across a pangenome.

Authors: Beavan AJS McInerney JO

Source: Nature microbiology [Nat Microbiol] 2022 Oct; Vol. 7 (10), pp. 1510-1511.

Publication Type: Journal Article; Comment

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print Cited Medium: Internet ISSN: 2058-5276 (Electronic) Linking ISSN: 20585276 NLM ISO Abbreviation: Nat Microbiol Subsets: MEDLINE

Diversification dynamics of total-, stem-, and crown-groups are compatible with molecular clock estimates of divergence times.

Authors: Beavan AJS Pisani D Donoghue PCJ

Source: Science advances [Sci Adv] 2021 Jun 11; Vol. 7 (24). Date of Electronic Publication: 2021 Jun 11 (Print Publication: 2021).

Publication Type: Journal Article

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 101653440 Publication Model: Electronic-Print Cited Medium: Internet ISSN: 2375-2548 (Electronic) Linking ISSN: 23752548 NLM ISO Abbreviation: Sci Adv Subsets: MEDLINE; PubMed not MEDLINE