Search Results - "Birol I"

HLA‐A*11:01 and HLA‐C*04:01 are associated with severe COVID‐19.

Authors: Castro‐Santos, Patricia Rojas‐Martinez, Augusto Riancho, José A. et al.

Source: HLA: Immune Response Genetics. Dec2023, Vol. 102 Issue 6, p731-739. 9p.

Genome misassembly detection using Stash: A data structure based on stochastic tile hashing.

Authors: Sarvar A Coombe L Birol I

Source: PloS one [PLoS One] 2026 Jul 13; Vol. 21 (7), pp. e0333729. Date of Electronic Publication: 2026 Jul 13 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

AIEdit: Alignment-free genome assembly polisher trained on spaced seed match patterns.

Authors: Kazemi P Sánchez Olivares I Warren RL et al.

Source: PLoS computational biology [PLoS Comput Biol] 2026 May 06; Vol. 22 (5), pp. e1014245. Date of Electronic Publication: 2026 May 06 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

ntStat: k-mer characterization using occurrence statistics in raw sequencing data.

Authors: Kazemi P Coombe L Warren RL et al.

Source: PLoS computational biology [PLoS Comput Biol] 2026 Apr 01; Vol. 22 (4), pp. e1014158. Date of Electronic Publication: 2026 Apr 01 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Efficacy and safety evaluation of artificial intelligence-identified antimicrobial peptides targeting avian pathogenic Escherichia coli in broiler chickens.

Authors: Demirsoy E Parkin TI Mihalynuk SE et al.

Source: Journal of animal science and biotechnology [J Anim Sci Biotechnol] 2026 May 15; Vol. 17 (1). Date of Electronic Publication: 2026 May 15.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101581293 Publication Model: Electronic Cited Medium: Print ISSN: 1674-9782 (Print) Linking ISSN: 16749782 NLM ISO Abbreviation: J Anim Sci Biotechnol Subsets: PubMed not MEDLINE

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A comprehensive tandem repeat catalog of the human genome.

Authors: Chiu R Rajan-Babu IS Friedman JM et al.

Source: Nature communications [Nat Commun] 2026 Jan 28; Vol. 17 (1), pp. 1106. Date of Electronic Publication: 2026 Jan 28.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Establishment of a congenic strain for the oyster mushroom reveals the structure and evolution of mating-type loci.

Authors: Lee, Yi-Yun Vidal-Diez de Ulzurrun, Guillermo Tay, Rebecca J. et al.

Source: PLoS Genetics. 4/8/2026, Vol. 22 Issue 4, p1-21. 21p.

First draft genome and genomic analysis of Neofusicoccum parvum isolated from mango (Mangifera indica L.) in Paraguay.

Authors: Méndez, Micaela Acuña, Adolfo Mateo Morel Escobar, Mónica et al.

Source: Frontiers in Fungal Biology. 2026, p1-7. 7p.

TIPP-SD: A new method for species detection in microbiomes.

Authors: Shen, Chengze Wedell, Eleanor Pop, Mihai et al.

Source: PLoS Computational Biology. 5/28/2026, Vol. 22 Issue 5, p1-18. 18p.

Evolutionary engineering of Geobacillus thermoleovorans for growth on adipic acid and 1,4-butanediol.

Authors: Op de Hipt, Leonie Jäger, Amelie Luthe, Tom et al.

Source: Applied Microbiology & Biotechnology; 5/2/2026, Vol. 110 Issue 1, p1-18, 18p

Long-read sequencing transcriptome quantification with lr-kallisto.

Authors: Loving, Rebekah K. Sullivan, Delaney K. Reese, Fairlie et al.

Source: PLoS Computational Biology. 12/1/2025, Vol. 21 Issue 12, p1-18. 18p.

AMPSeek: A Workflow for Predicting Antimicrobial Peptide Activity, Three-Dimensional Structure, and Toxicity.

Authors: Zhang E Ucar B Salehi A et al.

Source: Current protocols [Curr Protoc] 2026 Feb; Vol. 6 (2), pp. e70325.

Publication Type: Journal Article

Journal Info: Publisher: John Wiley & Sons Country of Publication: United States NLM ID: 101773894 Publication Model: Print Cited Medium: Internet ISSN: 2691-1299 (Electronic) Linking ISSN: 26911299 NLM ISO Abbreviation: Curr Protoc Subsets: MEDLINE

Comparative study of microstructural evolution and mechanical behavior in automotive control arms processed from continuously cast ingots and extruded rods.

Authors: Jia, Tizhuo Liu, Zhimin Xu, Zhen et al.

Source: Metallurgical Research & Technology. 2025, Vol. 122 Issue 6, p1-9. 9p.

Subjects: Aluminum alloys, Microstructure, Automobile parts, Aluminum ingots, Metal products, Automobile industry, Mechanical behavior of materials, Metal crystal growth

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Genomic and phenotypic insights into the expanding phylogenetic landscape of the Cryptococcus genus.

Authors: Coelho, Marco A. David-Palma, Márcia Kachalkin, Aleksey V. et al.

Source: PLoS Genetics. 11/10/2025, Vol. 21 Issue 11, p1-44. 44p.

Ten simple rules for making biomedical data resources accessible.

Authors: Smits, Thomas C. Weru, Lawrence Gehlenborg, Nils et al.

Source: PLoS Computational Biology. 11/6/2025, Vol. 21 Issue 11, p1-9. 9p.

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Isolation, characterization and biocontrol of a novel bacteriophage against Ralstonia pseudosolanacearum.

Authors: Liu, Shoude Wen, Rong Li, Qifeng et al.

Source: Applied Microbiology & Biotechnology; 4/15/2026, Vol. 110 Issue 1, p1-15, 15p