Search Results - "Bloom JS"

Automated implementation of the SwabSeq COVID-19 diagnostic assay on the opentrons flex liquid-handling robot.

Authors: Jakub TE Abhyankar V Toy T et al.

Source: Diagnostic microbiology and infectious disease [Diagn Microbiol Infect Dis] 2026 Jun 17; Vol. 116 (3), pp. 117519. Date of Electronic Publication: 2026 Jun 17.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Biomedical Country of Publication: United States NLM ID: 8305899 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0070 (Electronic) Linking ISSN: 07328893 NLM ISO Abbreviation: Diagn Microbiol Infect Dis Subsets: MEDLINE

High-resolution deep mutational scanning of the melanocortin-4 receptor enables target characterization for drug discovery.

Authors: Howard CJ Abell NS Osuna BA et al.

Source: ELife [Elife] 2025 Apr 09; Vol. 13. Date of Electronic Publication: 2025 Apr 09.

Publication Type: Journal Article

Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

Single-cell eQTL mapping in yeast reveals a tradeoff between growth and reproduction.

Authors: Boocock J Alexander N Alamo Tapia L et al.

Source: ELife [Elife] 2025 Mar 12; Vol. 13. Date of Electronic Publication: 2025 Mar 12.

Publication Type: Journal Article

Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

Exploring the genetic architecture of protein secretion in Komagataella phaffii (Pichia pastoris) for biotechnology applications.

Authors: Swichkow CR Bloom JS Kruglyak L

Source: PLoS biology [PLoS Biol] 2022 Dec 16; Vol. 20 (12), pp. e3001911. Date of Electronic Publication: 2022 Dec 16 (Print Publication: 2022).

Publication Type: Journal Article; Comment

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol Subsets: MEDLINE

Genome-wide base editor screen identifies regulators of protein abundance in yeast.

Authors: Schubert OT Bloom JS Sadhu MJ et al.

Source: ELife [Elife] 2022 Nov 03; Vol. 11. Date of Electronic Publication: 2022 Nov 03.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

A massively parallel reporter assay library to screen short synthetic promoters in mammalian cells.

Authors: Zahm AM Owens WS Himes SR et al.

Source: Nature communications [Nat Commun] 2024 Nov 28; Vol. 15 (1), pp. 10353. Date of Electronic Publication: 2024 Nov 28.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Divergent C. elegans toxin alleles are suppressed by distinct mechanisms.

Authors: Zdraljevic S Walter-McNeill L Bruni GN et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Nov 20. Date of Electronic Publication: 2024 Nov 20.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Single-cell eQTL mapping in yeast reveals a tradeoff between growth and reproduction.

Authors: Boocock J Alexander N Tapia LA et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Nov 08. Date of Electronic Publication: 2024 Nov 08.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA.

Authors: Guo L Boocock J Hilt EE et al.

Source: BMC genomics [BMC Genomics] 2022 Apr 04; Vol. 23 (1), pp. 260. Date of Electronic Publication: 2022 Apr 04.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

Retrospective Detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Symptomatic Patients Prior to Widespread Diagnostic Testing in Southern California.

Authors: Hilt EE Boocock J Trejo M et al.

Source: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America [Clin Infect Dis] 2022 Jan 29; Vol. 74 (2), pp. 271-277.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 9203213 Publication Model: Print Cited Medium: Internet ISSN: 1537-6591 (Electronic) Linking ISSN: 10584838 NLM ISO Abbreviation: Clin Infect Dis Subsets: MEDLINE

The complex circumstellar environment of supernova 2023ixf.

Authors: Zimmerman EA Irani I Chen P et al.

Source: Nature [Nature] 2024 Mar; Vol. 627 (8005), pp. 759-762. Date of Electronic Publication: 2024 Mar 27.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE; PubMed not MEDLINE

Whole-organism eQTL mapping at cellular resolution with single-cell sequencing.

Authors: Ben-David E Boocock J Guo L et al.

Source: ELife [Elife] 2021 Mar 18; Vol. 10. Date of Electronic Publication: 2021 Mar 18.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

Ancient balancing selection maintains incompatible versions of the galactose pathway in yeast.

Authors: Boocock J Sadhu MJ Durvasula A et al.

Source: Science (New York, N.Y.) [Science] 2021 Jan 22; Vol. 371 (6527), pp. 415-419.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE

Modeling epistasis in mice and yeast using the proportion of two or more distinct genetic backgrounds: Evidence for "polygenic epistasis".

Authors: Rau CD Gonzales NM Bloom JS et al.

Source: PLoS genetics [PLoS Genet] 2020 Oct 26; Vol. 16 (10), pp. e1009165. Date of Electronic Publication: 2020 Oct 26 (Print Publication: 2020).

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7404 (Electronic) Linking ISSN: 15537390 NLM ISO Abbreviation: PLoS Genet Subsets: MEDLINE

Revealing ferroelectric switching character using deep recurrent neural networks.

Authors: Agar JC Naul B Pandya S et al.

Source: Nature communications [Nat Commun] 2019 Oct 22; Vol. 10 (1), pp. 4809. Date of Electronic Publication: 2019 Oct 22.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE; PubMed not MEDLINE

Discovery and Validation of Context-Dependent Synthetic Mammalian Promoters.

Authors: Zahm AM Owens WS Himes SR et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2023 May 11. Date of Electronic Publication: 2023 May 11.

Publication Type: Preprint; Journal Article

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Highly complete long-read genomes reveal pangenomic variation underlying yeast phenotypic diversity.

Authors: Weller CA Andreev I Chambers MJ et al.

Corporate Authors: Weller CA Andreev I Chambers MJ et al.

Source: Genome research [Genome Res] 2023 May; Vol. 33 (5), pp. 729-740. Date of Electronic Publication: 2023 May 01.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Intramural

Journal Info: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1549-5469 (Electronic) Linking ISSN: 10889051 NLM ISO Abbreviation: Genome Res Subsets: MEDLINE

A radio-detected type Ia supernova with helium-rich circumstellar material.

Authors: Kool EC Johansson J Sollerman J et al.

Source: Nature [Nature] 2023 May; Vol. 617 (7961), pp. 477-482. Date of Electronic Publication: 2023 May 17.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE; PubMed not MEDLINE

Insufficient evidence for non-neutrality of synonymous mutations.

Authors: Kruglyak L Beyer A Bloom JS et al.

Source: Nature [Nature] 2023 Apr; Vol. 616 (7957), pp. E8-E9. Date of Electronic Publication: 2023 Apr 19.

Publication Type: Letter; Comment

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

Discovery of a rapidly evolving yeast defense factor, KTD1, against the secreted killer toxin K28.

Authors: Andreev I Laidlaw KME Giovanetti SM et al.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2023 Feb 21; Vol. 120 (8), pp. e2217194120. Date of Electronic Publication: 2023 Feb 17.

Publication Type: Journal Article; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE