Search Results - "Boemo MA"

Replication origin firing capacity indicates ATR inhibitor sensitivity.

Authors: Lumeau A Pfuderer PL Scarth JA et al.

Source: Nature communications [Nat Commun] 2026 Jun 19. Date of Electronic Publication: 2026 Jun 19.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

A high-resolution, nanopore-based artificial intelligence assay for DNA replication stress in human cancer cells.

Authors: Jones MJK Rai SK Pfuderer PL et al.

Source: Nature communications [Nat Commun] 2025 Aug 19; Vol. 16 (1), pp. 7732. Date of Electronic Publication: 2025 Aug 19.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Regulation of replication timing in Saccharomyces cerevisiae.

Authors: Berners-Lee R Gilmore E Berkemeier F et al.

Source: PLoS computational biology [PLoS Comput Biol] 2025 Jun 02; Vol. 21 (6), pp. e1013066. Date of Electronic Publication: 2025 Jun 02 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

DNA replication timing reveals genome-wide features of transcription and fragility.

Authors: Berkemeier F Cook PR Boemo MA

Source: Nature communications [Nat Commun] 2025 May 19; Vol. 16 (1), pp. 4658. Date of Electronic Publication: 2025 May 19.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Gioventù redenta e vecchiaia redentrice in Der Hagestolz di Adalbert Stifter. (Italian)

Authors: Ottavio, Francesca¹, francesca.ottavio@unical.it

Source: Other Modernities / Altre Modernita / Otras Modernidades / Autres Modernités; 2024, Issue 31, p512-527, 16p

The Beacon Calculus: A formal method for the flexible and concise modelling of biological systems.

Authors: Boemo MA Cardelli L Nieduszynski CA

Source: PLoS computational biology [PLoS Comput Biol] 2020 Mar 09; Vol. 16 (3), pp. e1007651. Date of Electronic Publication: 2020 Mar 09 (Print Publication: 2020).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Applying multilevel selection to understand cancer evolution and progression.

Authors: Laplane, Lucie Lamoureux, Anaïs Richker, Harley I. et al.

Source: PLoS Biology. 7/18/2025, Vol. 23 Issue 7, p1-22. 22p.

Relating simulation studies by provenance—Developing a family of Wnt signaling models.

Authors: Budde, Kai Smith, Jacob Wilsdorf, Pia et al.

Source: PLoS Computational Biology. 8/5/2021, Vol. 17 Issue 8, p1-27. 27p. 3 Diagrams, 1 Chart, 4 Graphs.

An Autonomous Oscillation Times and Executes Centriole Biogenesis.

Authors: Aydogan MG Steinacker TL Mofatteh M et al.

Source: Cell [Cell] 2020 Jun 25; Vol. 181 (7), pp. 1566-1581.e27. Date of Electronic Publication: 2020 Jun 11.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE

Where and when to start: Regulating DNA replication origin activity in eukaryotic genomes.

Authors: Lee, Clare S.K. Weiβ, Matthias Hamperl, Stephan

Source: Nucleus (1949-1034). Dec2023, Vol. 14 Issue 1, p1-26. 26p.

Intellectual disability genomics: current state, pitfalls and future challenges.

Authors: Maia, Nuno Nabais Sá, Maria João Melo-Pires, Manuel et al.

Source: BMC Genomics. 12/20/2021, Vol. 22 Issue 1, p1-17. 17p.

Nanopore sequencing and de novo assembly of a misidentified Camelpox vaccine reveals putative epigenetic modifications and alternate protein signal peptides.

Authors: Saud, Zack Hitchings, Matthew D. Butt, Tariq M.

Source: Scientific Reports. 9/7/2021, Vol. 11 Issue 1, p1-13. 13p.

DNAscent v2: detecting replication forks in nanopore sequencing data with deep learning.

Authors: Boemo, Michael A.¹ (AUTHOR) mb915@cam.ac.uk

Source: BMC Genomics. 6/9/2021, Vol. 22 Issue 1, p1-8. 8p.

Oncological diseases in St. Petersburg, Russia.

Authors: Kolpak, Eugeny P. Frantsuzova, Inna S. Evmenova, Elizaveta O.

Source: Drug Invention Today. Mar2019, Vol. 11 Issue 3, p510-516. 7p.

ecDNA replication is disorganized and vulnerable to replication stress.

Authors: Jaworski JJ Pfuderer PL Czyz P et al.

Source: Nucleic acids research [Nucleic Acids Res] 2025 Jul 19; Vol. 53 (14).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

DNA replication dynamics are associated with genome composition in Plasmodium species.

Authors: Totañes FIG Chapman SE Rai SK et al.

Source: Nucleic acids research [Nucleic Acids Res] 2025 Feb 08; Vol. 53 (4).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Extrachromosomal DNA in Solid Tumors-Landscape, Immune Effects, and Resistance to Targeted Therapy.

Authors: Badran O Attarya S

Source: Oncology research [Oncol Res] 2026 Apr 22; Vol. 34 (5), pp. 8. Date of Electronic Publication: 2026 Apr 22 (Print Publication: 2026).

Publication Type: Journal Article; Review

Journal Info: Publisher: Tech Science Press Country of Publication: United States NLM ID: 9208097 Publication Model: eCollection Cited Medium: Internet ISSN: 1555-3906 (Electronic) Linking ISSN: 09650407 NLM ISO Abbreviation: Oncol Res Subsets: MEDLINE

The expanding roles of homologous recombination proteins in genome stability.

Authors: Sassi L Martinez Marroquin A Waked S et al.

Source: The EMBO journal [EMBO J] 2026 Feb; Vol. 45 (3), pp. 637-654. Date of Electronic Publication: 2026 Jan 03.

Publication Type: Journal Article; Review

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8208664 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1460-2075 (Electronic) Linking ISSN: 02614189 NLM ISO Abbreviation: EMBO J Subsets: MEDLINE

The role of extrachromosomal DNA in tumorigenesis and progression.

Authors: Ma X Yu X Wu C et al.

Source: Frontiers in oncology [Front Oncol] 2025 Sep 15; Vol. 15, pp. 1665024. Date of Electronic Publication: 2025 Sep 15 (Print Publication: 2025).

Publication Type: Journal Article; Review

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101568867 Publication Model: eCollection Cited Medium: Print ISSN: 2234-943X (Print) Linking ISSN: 2234943X NLM ISO Abbreviation: Front Oncol Subsets: PubMed not MEDLINE

A genome-wide map of DNA replication at single-molecule resolution in the malaria parasite Plasmodium falciparum.

Authors: Totañes FIG Gockel J Chapman SE et al.

Source: Nucleic acids research [Nucleic Acids Res] 2023 Apr 11; Vol. 51 (6), pp. 2709-2724.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE