Search Results - "Burckhardt JC"

PUPpy: a primer design pipeline for substrain-level microbial detection and absolute quantification.

Authors: Ghezzi H Fan YM Ng KM et al.

Source: MSphere [mSphere] 2024 Jul 30; Vol. 9 (7), pp. e0036024. Date of Electronic Publication: 2024 Jul 09.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101674533 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5042 (Electronic) Linking ISSN: 23795042 NLM ISO Abbreviation: mSphere Subsets: MEDLINE

Inoviruses.

Authors: Burckhardt JC Tropini C

Source: Current biology : CB [Curr Biol] 2023 Dec 18; Vol. 33 (24), pp. R1272-R1274.

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: England NLM ID: 9107782 Publication Model: Print Cited Medium: Internet ISSN: 1879-0445 (Electronic) Linking ISSN: 09609822 NLM ISO Abbreviation: Curr Biol Subsets: MEDLINE

Single-strain behavior predicts responses to environmental pH and osmolality in the gut microbiota.

Authors: Ng KM Pannu S Liu S et al.

Source: MBio [mBio] 2023 Aug 31; Vol. 14 (4), pp. e0075323. Date of Electronic Publication: 2023 Jul 11.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101519231 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2150-7511 (Electronic) NLM ISO Abbreviation: mBio Subsets: MEDLINE

A high-quality reference genome for the common creek chub, Semotilus atromaculatus.

Authors: Meuser, Amanda V Pitura, Amy R Mandeville, Elizabeth G

Source: G3: Genes | Genomes | Genetics. Feb2024, Vol. 14 Issue 2, p1-9. 9p.

Study of an Enterococcus faecium strain isolated from an artisanal Mexican cheese, whole-genome sequencing, comparative genomics, and bacteriocin expression.

Authors: Acero-Pimentel, Daniel Romero-Sánchez, Diana I. Fuentes-Curiel, Sac Nicté et al.

Source: Antonie van Leeuwenhoek. 10/15/2024, Vol. 117 Issue 1, p1-16. 16p.

Assessing the population genetic structure of introduced rainbow trout (Oncorhynchus mykiss) in the Lake Tahoe basin: implications for hybridization potential during the reintroduction of native Lahontan cutthroat trout (O. clarkii henshawi).

Authors: Galland, L. M. Parchman, T. L. Peacock, M. M.

Source: Hydrobiologia. Jun2024, Vol. 851 Issue 11, p2573-2590. 18p.

Novel technique for suppressing an invasive apex predator minimally alters nitrogen dynamics in Yellowstone Lake, Wyoming, USA.

Authors: Tronstad, Lusha M. Lujan, Dominique R. Briggs, Michelle A. et al.

Source: Hydrobiologia. May2024, Vol. 851 Issue 9, p2215-2236. 22p.

The effect of in vitro simulated colonic pH gradients on microbial activity and metabolite production using common prebiotics as substrates.

Authors: Xie, Zhuqing He, Weiwei Gobbi, Alex et al.

Source: BMC Microbiology. 3/11/2024, Vol. 24 Issue 1, p1-13. 13p.

Novel primers to identify a wider diversity of butyrate-producing bacteria.

Authors: Meng, Xianbin Shu, Qinglong

Source: World Journal of Microbiology & Biotechnology. Feb2024, Vol. 40 Issue 2, p1-15. 15p.

Current and historical patterns of recruitment of Yellowstone cutthroat trout in Yellowstone Lake, Wyoming, as revealed by otolith microchemistry.

Authors: Stewart, Kole P. McMahon, Thomas E. Koel, Todd M. et al.

Source: Hydrobiologia. Jan2024, Vol. 851 Issue 1, p7-24. 18p.

Molecular analyses unveil colouration patterns to detect hybridization between two of the most invasive peacock bass species (Cichliformes: Cichlidae).

Authors: de Souza Cruz Nóbrega, Felipe dos Santos, Luciano Neves Franco, Ana Clara Sampaio et al.

Source: Biological Invasions. Sep2023, Vol. 25 Issue 9, p2873-2890. 18p.

Using recovered radio transmitters to estimate positioning error and a generalized Monte Carlo simulation to incorporate error into animal telemetry analysis.

Authors: Heim, Kurt C. Ardren, William R. Castro-Santos, Theodore

Source: Animal Biotelemetry. 6/29/2023, Vol. 11 Issue 1, p1-13. 13p.

Characterizing the movements and habitat use of two fish species of concern in a regulated ecosystem.

Authors: Garavelli, Lysel Blackburn, Shannon E. Scholz, Allan T. et al.

Source: Hydrobiologia. Oct2021, Vol. 848 Issue 17, p4059-4074. 16p. 2 Charts, 5 Graphs, 1 Map.

Efficient Editing of an Adenoviral Vector Genome with CRISPR/Cas9.

Authors: Li, Qiang Wang, Hui Gong, Chen-yu et al.

Source: Indian Journal of Microbiology. 2021, Vol. 61 Issue 1, p91-95. 5p.

Biological bank protection: trees are more effective than grasses at resisting erosion from major river floods.

Authors: Rood, Stewart B. Bigelow, Sarah G. Polzin, Mary Louise et al.

Source: Ecohydrology. Jul2015, Vol. 8 Issue 5, p772-779. 8p.

Genomic differentiation across the speciation continuum in three hummingbird species pairs.

Authors: Henderson, Elisa C. Brelsford, Alan

Source: BMC Evolutionary Biology. 9/3/2020, Vol. 20 Issue 1, pN.PAG-N.PAG. 1p.

Gut commensal Enterocloster species host inoviruses that are secreted in vitro and in vivo.

Authors: Burckhardt JC Chong DHY Pett N et al.

Source: Microbiome [Microbiome] 2023 Mar 30; Vol. 11 (1), pp. 65. Date of Electronic Publication: 2023 Mar 30.

Publication Type: Video-Audio Media; Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618 (Electronic) Linking ISSN: 20492618 NLM ISO Abbreviation: Microbiome Subsets: MEDLINE

The patient's private and canons of science: Freud's case studies.

Authors: Werbart A; andrzej@werbart.se

Source: The International journal of psycho-analysis [Int J Psychoanal] 2005 Oct; Vol. 86 (Pt 5), pp. 1441-61.

Publication Type: Biography; Historical Article; Journal Article

Journal Info: Publisher: Taylor & Francis Country of Publication: England NLM ID: 2985179R Publication Model: Print Cited Medium: Print ISSN: 0020-7578 (Print) Linking ISSN: 00207578 NLM ISO Abbreviation: Int J Psychoanal Subsets: MEDLINE

Urease in acetogenic Lachnospiraceae drives urea carbon salvage in SCFA pools.

Authors: Firth IJ Sim MAR Fitzgerald BG et al.

Source: Gut microbes [Gut Microbes] 2025 Dec; Vol. 17 (1), pp. 2492376. Date of Electronic Publication: 2025 Apr 15.

Publication Type: Journal Article

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101495343 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1949-0984 (Electronic) Linking ISSN: 19490976 NLM ISO Abbreviation: Gut Microbes Subsets: MEDLINE

Proton-pump inhibitors increase C. difficile infection risk by altering pH rather than by affecting the gut microbiome based on a bioreactor model.

Authors: Schumacher J Müller P Sulzer J et al.

Source: Gut microbes [Gut Microbes] 2025 Dec; Vol. 17 (1), pp. 2519697. Date of Electronic Publication: 2025 Jun 16.

Publication Type: Journal Article

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101495343 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1949-0984 (Electronic) Linking ISSN: 19490976 NLM ISO Abbreviation: Gut Microbes Subsets: MEDLINE