Search Results - "Chain PS"

Community and gene composition of a human dental plaque microbiota obtained by metagenomic sequencing.

Authors: Xie G Chain PS Lo CC et al.

Source: Molecular Oral Microbiology. Dec2010, Vol. 25 Issue 6, p391-405. 15p.

A new species of true morel from Switzerland: Morchella helvetica, sp. nov.

Authors: Cravero M Bonito G Chain PS et al.

Source: Mycologia [Mycologia] 2024 Nov-Dec; Vol. 116 (6), pp. 1101-1109. Date of Electronic Publication: 2024 Oct 18.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Taylor & Francis Country of Publication: England NLM ID: 0400764 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1557-2536 (Electronic) Linking ISSN: 00275514 NLM ISO Abbreviation: Mycologia Subsets: MEDLINE

Impact of Oxalic Acid Consumption and pH on the In Vitro Biological Control of Oxalogenic Phytopathogen Sclerotinia sclerotiorum.

Authors: Estoppey A Vallat-Michel A Chain PS et al.

Source: Journal of fungi (Basel, Switzerland) [J Fungi (Basel)] 2025 Mar 02; Vol. 11 (3). Date of Electronic Publication: 2025 Mar 02.

Publication Type: Journal Article

Journal Info: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101671827 Publication Model: Electronic Cited Medium: Internet ISSN: 2309-608X (Electronic) Linking ISSN: 2309608X NLM ISO Abbreviation: J Fungi (Basel) Subsets: PubMed not MEDLINE

Assessing the speed of individual bacteria dispersing on mycelial networks.

Authors: Buffi M Kuhn T Gonzalez D et al.

Source: Evolutionary ecology [Evol Ecol] 2025; Vol. 39 (6), pp. 681-693. Date of Electronic Publication: 2025 Jan 25.

Publication Type: Journal Article

Journal Info: Publisher: Springer International Country of Publication: Germany NLM ID: 9882858 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0269-7653 (Print) Linking ISSN: 02697653 NLM ISO Abbreviation: Evol Ecol Subsets: PubMed not MEDLINE

Host and nonhost bacteria support bacteriophage dissemination along mycelia and abiotic dispersal networks.

Authors: Périat C Kuhn T Buffi M et al.

Source: MicroLife [Microlife] 2024 Feb 20; Vol. 5, pp. uqae004. Date of Electronic Publication: 2024 Feb 20 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918227365406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2633-6693 (Electronic) Linking ISSN: 26336693 NLM ISO Abbreviation: Microlife Subsets: PubMed not MEDLINE

Fungal drops: a novel approach for macro- and microscopic analyses of fungal mycelial growth.

Authors: Buffi M Cailleau G Kuhn T et al.

Source: MicroLife [Microlife] 2023 Oct 18; Vol. 4, pp. uqad042. Date of Electronic Publication: 2023 Oct 18 (Print Publication: 2023).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918227365406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2633-6693 (Electronic) Linking ISSN: 26336693 NLM ISO Abbreviation: Microlife Subsets: PubMed not MEDLINE

The evolution of a super-swarm of foot-and-mouth disease virus in cattle.

Authors: Arzt J Fish I Pauszek SJ et al.

Source: PloS one [PLoS One] 2019 Apr 25; Vol. 14 (4), pp. e0210847. Date of Electronic Publication: 2019 Apr 25 (Print Publication: 2019).

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Cryptosporulation in Kurthia spp. forces a rethinking of asporogenesis in Firmicutes.

Authors: Fatton M Filippidou S Junier T et al.

Source: Environmental microbiology [Environ Microbiol] 2022 Dec; Vol. 24 (12), pp. 6320-6335. Date of Electronic Publication: 2022 Aug 17.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Blackwell Science Country of Publication: England NLM ID: 100883692 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1462-2920 (Electronic) Linking ISSN: 14622912 NLM ISO Abbreviation: Environ Microbiol Subsets: MEDLINE

Towards increased accuracy and reproducibility in SARS-CoV-2 next generation sequence analysis for public health surveillance.

Authors: Connor R Yarmosh DA Maier W et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2022 Nov 03. Date of Electronic Publication: 2022 Nov 03.

Publication Type: Preprint; Journal Article

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Design and construction of 3D printed devices to investigate active and passive bacterial dispersal on hydrated surfaces.

Authors: Kuhn T Buffi M Bindschedler S et al.

Source: BMC biology [BMC Biol] 2022 Sep 14; Vol. 20 (1), pp. 203. Date of Electronic Publication: 2022 Sep 14.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007 (Electronic) Linking ISSN: 17417007 NLM ISO Abbreviation: BMC Biol Subsets: MEDLINE

Importance of appropriate genome information for the design of mating type primers in black and yellow morel populations.

Authors: Cravero M Robinson AJ Hilpisch P et al.

Source: IMA fungus [IMA Fungus] 2022 Aug 22; Vol. 13 (1), pp. 14. Date of Electronic Publication: 2022 Aug 22.

Publication Type: Letter

Journal Info: Publisher: Pensoft Country of Publication: Bulgaria NLM ID: 101557546 Publication Model: Electronic Cited Medium: Print ISSN: 2210-6340 (Print) Linking ISSN: 22106340 NLM ISO Abbreviation: IMA Fungus Subsets: PubMed not MEDLINE

Improved methods to assess the effect of bacteria on germination of fungal spores.

Authors: Estoppey A Weisskopf L Di Francesco E et al.

Source: FEMS microbiology letters [FEMS Microbiol Lett] 2022 Apr 21; Vol. 369 (1).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 7705721 Publication Model: Print Cited Medium: Internet ISSN: 1574-6968 (Electronic) Linking ISSN: 03781097 NLM ISO Abbreviation: FEMS Microbiol Lett Subsets: MEDLINE

Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform.

Authors: Li PE Lo CC Anderson JJ et al.

Source: Nucleic acids research [Nucleic Acids Res] 2017 Jan 09; Vol. 45 (1), pp. 67-80. Date of Electronic Publication: 2016 Nov 28.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Functional and Structural Analysis of a Highly-Expressed Yersinia pestis Small RNA following Infection of Cultured Macrophages.

Authors: Li N Hennelly SP Stubben CJ et al.

Source: PloS one [PLoS One] 2016 Dec 28; Vol. 11 (12), pp. e0168915. Date of Electronic Publication: 2016 Dec 28 (Print Publication: 2016).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Whole-Genome Comparative Analysis of Two Carbapenem-Resistant ST-258 Klebsiella pneumoniae Strains Isolated during a North-Eastern Ohio Outbreak: Differences within the High Heterogeneity Zones.

Authors: Ramirez MS Xie G Traglia GM et al.

Source: Genome biology and evolution [Genome Biol Evol] 2016 Jul 03; Vol. 8 (6), pp. 2036-43. Date of Electronic Publication: 2016 Jul 03.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Electronic Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

ADEPT, a dynamic next generation sequencing data error-detection program with trimming.

Authors: Feng S Lo CC Li PE et al.

Source: BMC bioinformatics [BMC Bioinformatics] 2016 Feb 29; Vol. 17, pp. 109. Date of Electronic Publication: 2016 Feb 29.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

CRP-Mediated Carbon Catabolite Regulation of Yersinia pestis Biofilm Formation Is Enhanced by the Carbon Storage Regulator Protein, CsrA.

Authors: Willias SP Chauhan S Lo CC et al.

Source: PloS one [PLoS One] 2015 Aug 25; Vol. 10 (8), pp. e0135481. Date of Electronic Publication: 2015 Aug 25 (Print Publication: 2015).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Accurate read-based metagenome characterization using a hierarchical suite of unique signatures.

Authors: Freitas TA Li PE Scholz MB et al.

Source: Nucleic acids research [Nucleic Acids Res] 2015 May 26; Vol. 43 (10), pp. e69. Date of Electronic Publication: 2015 Mar 12.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Validation Study

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Scanning the landscape of genome architecture of non-O1 and non-O139 Vibrio cholerae by whole genome mapping reveals extensive population genetic diversity.

Authors: Chapman C Henry M Bishop-Lilly KA et al.

Source: PloS one [PLoS One] 2015 Mar 20; Vol. 10 (3), pp. e0120311. Date of Electronic Publication: 2015 Mar 20 (Print Publication: 2015).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Rapid evaluation and quality control of next generation sequencing data with FaQCs.

Authors: Lo CC Chain PS

Source: BMC bioinformatics [BMC Bioinformatics] 2014 Nov 19; Vol. 15, pp. 366. Date of Electronic Publication: 2014 Nov 19.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE