Search Results - "Chain PSG"

Significance and challenges in dissecting cancer-bacteriome interactions.

Authors: Alshareedah I Brunner JD Chain PSG et al.

Source: BJC reports [BJC Rep] 2026 May 04; Vol. 4 (1). Date of Electronic Publication: 2026 May 04.

Publication Type: Journal Article; Review

Journal Info: Publisher: Nature Portfolio Country of Publication: England NLM ID: 9918752188106676 Publication Model: Electronic Cited Medium: Internet ISSN: 2731-9377 (Electronic) Linking ISSN: 27319377 NLM ISO Abbreviation: BJC Rep Subsets: PubMed not MEDLINE

Amplicon and metagenomic data from fumarole-associated geothermal features of Hawai'i.

Authors: Saw JH Shlafstein MD Pavloudi C et al.

Source: Scientific data [Sci Data] 2026 Jun 24. Date of Electronic Publication: 2026 Jun 24.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Methods for evaluating bacterial dispersal on hyphal networks.

Authors: Bouchard A Darino M Cailleau G et al.

Source: MicroLife [Microlife] 2026 May 06; Vol. 7, pp. uqag017. Date of Electronic Publication: 2026 May 06 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918227365406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2633-6693 (Electronic) Linking ISSN: 26336693 NLM ISO Abbreviation: Microlife Subsets: PubMed not MEDLINE

N-acyl-homoserine lactone-based quorum sensing beyond canonical lineages: insights from Actinomycetota.

Authors: Handel CR Prescott RD Lo CC et al.

Source: Frontiers in microbiology [Front Microbiol] 2026 Apr 20; Vol. 17, pp. 1738013. Date of Electronic Publication: 2026 Apr 20 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE

STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies.

Authors: Kelliher JM Mirzayi C Bordenstein SR et al.

Corporate Authors: Kelliher JM Mirzayi C Bordenstein SR et al.

Source: Nature microbiology [Nat Microbiol] 2025 Dec; Vol. 10 (12), pp. 3059-3068. Date of Electronic Publication: 2025 Dec 01.

Publication Type: Journal Article; Review; Consensus Statement

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2058-5276 (Electronic) Linking ISSN: 20585276 NLM ISO Abbreviation: Nat Microbiol Subsets: MEDLINE

Detection of electrical signals in fungal mycelia in response to external stimuli.

Authors: Buffi M Giangaspero S Foiada V et al.

Source: IScience [iScience] 2025 Sep 02; Vol. 28 (10), pp. 113484. Date of Electronic Publication: 2025 Sep 02 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101724038 Publication Model: eCollection Cited Medium: Internet ISSN: 2589-0042 (Electronic) Linking ISSN: 25890042 NLM ISO Abbreviation: iScience Subsets: PubMed not MEDLINE

The endohyphal microbiome: current progress and challenges for scaling down integrative multi-omic microbiome research.

Authors: Kelliher JM Robinson AJ Longley R et al.

Source: Microbiome [Microbiome] 2023 Aug 26; Vol. 11 (1), pp. 192. Date of Electronic Publication: 2023 Aug 26.

Publication Type: Video-Audio Media; Letter; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618 (Electronic) Linking ISSN: 20492618 NLM ISO Abbreviation: Microbiome Subsets: MEDLINE

Microbiome data management in action workshop: Atlanta, GA, USA, June 12-13, 2024.

Authors: Kelliher JM Aljumaah M Bordenstein SR et al.

Source: Environmental microbiome [Environ Microbiome] 2025 Apr 19; Vol. 20 (1), pp. 40. Date of Electronic Publication: 2025 Apr 19.

Publication Type: Journal Article

Journal Info: Publisher: BMC Country of Publication: England NLM ID: 101768168 Publication Model: Electronic Cited Medium: Internet ISSN: 2524-6372 (Electronic) Linking ISSN: 25246372 NLM ISO Abbreviation: Environ Microbiome Subsets: PubMed not MEDLINE

Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution.

Authors: Tao G Ahrendt S Miyauchi S et al.

Source: IMA fungus [IMA Fungus] 2025 Feb 21; Vol. 16, pp. e138363. Date of Electronic Publication: 2025 Feb 21 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Pensoft Country of Publication: Bulgaria NLM ID: 101557546 Publication Model: eCollection Cited Medium: Print ISSN: 2210-6340 (Print) Linking ISSN: 22106340 NLM ISO Abbreviation: IMA Fungus Subsets: PubMed not MEDLINE

Investigating Bacterial-Fungal Interactions using Fungal Highway Columns in Diverse Environments and Substrates.

Authors: Kelliher JM Johnson LYD Robinson AJ et al.

Source: Journal of visualized experiments : JoVE [J Vis Exp] 2025 Jan 24 (215). Date of Electronic Publication: 2025 Jan 24.

Publication Type: Journal Article; Video-Audio Media; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: MYJoVE Corporation Country of Publication: United States NLM ID: 101313252 Publication Model: Electronic Cited Medium: Internet ISSN: 1940-087X (Electronic) Linking ISSN: 1940087X NLM ISO Abbreviation: J Vis Exp Subsets: MEDLINE

Electrical signaling in fungi: past and present challenges.

Authors: Buffi M Kelliher JM Robinson AJ et al.

Source: FEMS microbiology reviews [FEMS Microbiol Rev] 2025 Jan 14; Vol. 49.

Publication Type: Journal Article; Review

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 8902526 Publication Model: Print Cited Medium: Internet ISSN: 1574-6976 (Electronic) Linking ISSN: 01686445 NLM ISO Abbreviation: FEMS Microbiol Rev Subsets: MEDLINE

Erratum for Longley et al., "Signatures of Mollicutes-related endobacteria in publicly available Mucoromycota genomes".

Authors: Longley R Robinson AJ Asher OA et al.

Source: MSphere [mSphere] 2024 Dec 19; Vol. 9 (12), pp. e0088124. Date of Electronic Publication: 2024 Nov 18.

Publication Type: Journal Article; Published Erratum

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101674533 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5042 (Electronic) Linking ISSN: 23795042 NLM ISO Abbreviation: mSphere Subsets: MEDLINE; PubMed not MEDLINE

EDGE COVID-19: a web platform to generate submission-ready genomes from SARS-CoV-2 sequencing efforts.

Authors: Lo CC Shakya M Connor R et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2022 May 13; Vol. 38 (10), pp. 2700-2704.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Multiple Cases of Bacterial Sequence Erroneously Incorporated Into Publicly Available Chloroplast Genomes.

Authors: Robinson AJ Daligault HE Kelliher JM et al.

Source: Frontiers in genetics [Front Genet] 2022 Jan 13; Vol. 12, pp. 821715. Date of Electronic Publication: 2022 Jan 13 (Print Publication: 2021).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101560621 Publication Model: eCollection Cited Medium: Print ISSN: 1664-8021 (Print) Linking ISSN: 16648021 NLM ISO Abbreviation: Front Genet Subsets: PubMed not MEDLINE

Standardized and accessible multi-omics bioinformatics workflows through the NMDC EDGE resource.

Authors: Kelliher JM Xu Y Flynn MC et al.

Source: Computational and structural biotechnology journal [Comput Struct Biotechnol J] 2024 Sep 27; Vol. 23, pp. 3575-3583. Date of Electronic Publication: 2024 Sep 27 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology Country of Publication: Netherlands NLM ID: 101585369 Publication Model: eCollection Cited Medium: Print ISSN: 2001-0370 (Print) Linking ISSN: 20010370 NLM ISO Abbreviation: Comput Struct Biotechnol J Subsets: PubMed not MEDLINE

Signatures of Mollicutes-related endobacteria in publicly available Mucoromycota genomes.

Authors: Longley R Robinson AJ Asher OA et al.

Source: MSphere [mSphere] 2024 Sep 25; Vol. 9 (9), pp. e0030924. Date of Electronic Publication: 2024 Aug 27.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101674533 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5042 (Electronic) Linking ISSN: 23795042 NLM ISO Abbreviation: mSphere Subsets: MEDLINE

Fabricated devices for performing bacterial-fungal interaction experiments across scales.

Authors: Kelliher JM Johnson LYD Robinson AJ et al.

Source: Frontiers in microbiology [Front Microbiol] 2024 Aug 07; Vol. 15, pp. 1380199. Date of Electronic Publication: 2024 Aug 07 (Print Publication: 2024).

Publication Type: Journal Article; Review

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE

Identification of mobile genetic elements with geNomad.

Authors: Camargo AP Roux S Schulz F et al.

Source: Nature biotechnology [Nat Biotechnol] 2024 Aug; Vol. 42 (8), pp. 1303-1312. Date of Electronic Publication: 2023 Sep 21.

Publication Type: Journal Article

Journal Info: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

Combining compositional data sets introduces error in covariance network reconstruction.

Authors: Brunner JD Robinson AJ Chain PSG

Source: ISME communications [ISME Commun] 2024 Apr 19; Vol. 4 (1), pp. ycae057. Date of Electronic Publication: 2024 Apr 19 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918205372406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2730-6151 (Electronic) Linking ISSN: 27306151 NLM ISO Abbreviation: ISME Commun Subsets: PubMed not MEDLINE

The complete genome sequence of probiotic Lactobacillus acidophilus ATCC 9224 isolated from sour milk.

Authors: Kumar A Rawat M Kunde YA et al.

Source: Microbiology resource announcements [Microbiol Resour Announc] 2024 Apr 11; Vol. 13 (4), pp. e0067723. Date of Electronic Publication: 2024 Mar 15.

Publication Type: Journal Article

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101728794 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2576-098X (Electronic) Linking ISSN: 2576098X NLM ISO Abbreviation: Microbiol Resour Announc Subsets: PubMed not MEDLINE