Search Results - "Cook DE"

A small unmanned aerial system (UAS) for coastal atmospheric research: preliminary results from New Zealand.

Authors: Cook, DE Strong, PA Garrett, SA et al.

Source: Journal of the Royal Society of New Zealand. Jun2013, Vol. 43 Issue 2, p108-115. 8p.

The eastern Australian magnetic inclination record: Dating the recent past and re-assessing the historical geomagnetic archive.

Authors: Gale, SJ Cook, DE Dorrington, NJ

Source: Holocene. Mar2013, Vol. 23 Issue 3, p398-415. 18p. 1 Diagram, 8 Charts, 4 Graphs.

Accurate human genome analysis with element avidity sequencing.

Authors: Carroll A Kolesnikov A Cook DE et al.

Source: BMC bioinformatics [BMC Bioinformatics] 2025 Jul 25; Vol. 26 (1), pp. 194. Date of Electronic Publication: 2025 Jul 25.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

A complete human pancreatic cancer genome.

Authors: Wagner J Keskus AG Oshima KK et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 May 10. Date of Electronic Publication: 2026 May 10.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Global genomic diversity of the selfing nematode Caenorhabditis tropicalis correlates with geography.

Authors: Wang B Moya ND Tanny RE et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 Apr 08. Date of Electronic Publication: 2026 Apr 08.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing.

Authors: Keskus AG Bryant A Ahmad T et al.

Source: Nature biotechnology [Nat Biotechnol] 2026 Feb; Vol. 44 (2), pp. 247-257. Date of Electronic Publication: 2025 Apr 04.

Publication Type: Journal Article

Journal Info: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

Retraction Note: Antibodies against endogenous retroviruses promote lung cancer immunotherapy.

Authors: Ng KW Boumelha J Enfield KSS et al.

Corporate Authors: Ng KW Boumelha J Enfield KSS et al.

Source: Nature [Nature] 2026 Jan; Vol. 649 (8099), pp. 1330.

Publication Type: Journal Article; Retraction Notice

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE; In Process

Caenorhabditis briggsae ancestral genomic hyper-diversity contrasts with globally distributed genome-wide haplotypes.

Authors: Moya ND Wang B Tanny RE et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Dec 14. Date of Electronic Publication: 2025 Dec 14.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic.

Authors: Park J Cook DE Chang PC et al.

Source: Nature biotechnology [Nat Biotechnol] 2025 Oct 16. Date of Electronic Publication: 2025 Oct 16.

Publication Type: Journal Article

Journal Info: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

Representation of genomic intratumor heterogeneity in multi-region non-small cell lung cancer patient-derived xenograft models.

Authors: Hynds RE Huebner A Pearce DR et al.

Corporate Authors: Hynds RE Huebner A Pearce DR et al.

Source: Nature communications [Nat Commun] 2024 May 31; Vol. 15 (1), pp. 4653. Date of Electronic Publication: 2024 May 31.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Implications of the three-dimensional chromatin organization for genome evolution in a fungal plant pathogen.

Authors: Torres DE Kramer HM Tracanna V et al.

Source: Nature communications [Nat Commun] 2024 Feb 24; Vol. 15 (1), pp. 1701. Date of Electronic Publication: 2024 Feb 24.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Highly accurate assembly polishing with DeepPolisher.

Authors: Mastoras M Asri M Brambrink L et al.

Corporate Authors: Mastoras M Asri M Brambrink L et al.

Source: Genome research [Genome Res] 2025 Jul 01; Vol. 35 (7), pp. 1595-1608. Date of Electronic Publication: 2025 Jul 01.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Electronic Cited Medium: Internet ISSN: 1549-5469 (Electronic) Linking ISSN: 10889051 NLM ISO Abbreviation: Genome Res Subsets: MEDLINE

Pangenome-aware DeepVariant.

Authors: Asri M Chang PC Mier JC et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Jun 06. Date of Electronic Publication: 2025 Jun 06.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Epigenetic regulation of nuclear processes in fungal plant pathogens.

Authors: Kramer HM Cook DE Seidl MF et al.

Source: PLoS pathogens [PLoS Pathog] 2023 Aug 03; Vol. 19 (8), pp. e1011525. Date of Electronic Publication: 2023 Aug 03 (Print Publication: 2023).

Publication Type: Journal Article; Review; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238921 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7374 (Electronic) Linking ISSN: 15537366 NLM ISO Abbreviation: PLoS Pathog Subsets: MEDLINE

Risk factors, lab parameters, angiographic characteristics and outcomes of coronary artery disease in young South Asian patients: a systematic review.

Authors: Agrawal A Lamichhane P Eghbali M et al.

Source: The Journal of international medical research [J Int Med Res] 2023 Aug; Vol. 51 (8), pp. 3000605231187806.

Publication Type: Systematic Review; Journal Article

Journal Info: Publisher: Sage Publications Country of Publication: England NLM ID: 0346411 Publication Model: Print Cited Medium: Internet ISSN: 1473-2300 (Electronic) Linking ISSN: 03000605 NLM ISO Abbreviation: J Int Med Res Subsets: MEDLINE

Clonal driver neoantigen loss under EGFR TKI and immune selection pressures.

Authors: Al Bakir M Reading JL Gamble S et al.

Source: Nature [Nature] 2025 Mar; Vol. 639 (8056), pp. 1052-1059. Date of Electronic Publication: 2025 Feb 19.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

Machine learning-based identification of general transcriptional predictors for plant disease.

Authors: Sia J Zhang W Cheng M et al.

Source: The New phytologist [New Phytol] 2025 Jan; Vol. 245 (2), pp. 785-806. Date of Electronic Publication: 2024 Nov 21.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Wiley on behalf of New Phytologist Trust Country of Publication: England NLM ID: 9882884 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1469-8137 (Electronic) Linking ISSN: 0028646X NLM ISO Abbreviation: New Phytol Subsets: MEDLINE

CRISPR-Cas12a induced DNA double-strand breaks are repaired by multiple pathways with different mutation profiles in Magnaporthe oryzae.

Authors: Huang J Rowe D Subedi P et al.

Source: Nature communications [Nat Commun] 2022 Nov 22; Vol. 13 (1), pp. 7168. Date of Electronic Publication: 2022 Nov 22.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

The distribution of mutational effects on fitness in Caenorhabditis elegans inferred from standing genetic variation.

Authors: Gilbert KJ Zdraljevic S Cook DE et al.

Source: Genetics [Genetics] 2022 Jan 04; Vol. 220 (1).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 0374636 Publication Model: Print Cited Medium: Internet ISSN: 1943-2631 (Electronic) Linking ISSN: 00166731 NLM ISO Abbreviation: Genetics

CRISPR guides induce gene silencing in plants in the absence of Cas.

Authors: Sharma VK Marla S Zheng W et al.

Source: Genome biology [Genome Biol] 2022 Jan 03; Vol. 23 (1), pp. 6. Date of Electronic Publication: 2022 Jan 03.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE