Search Results - "Cottrell KA"

Differential assembly of RNP granules via activation of distinct dsRNA sensors by adenovirus mutants.

Authors: Steinbock, Robert T. Scudero, Orlando B. Dybas, Joseph M. et al.

Source: PLoS Pathogens. 7/24/2026, Vol. 22 Issue 7, p1-29. 29p.

Position-dependent codon occurrence is associated with patterns of translational efficiency and ribosomal occupancy in the human transcriptome.

Authors: Subramanian, Kaavya Waugh, Nathan Shanks, Cole et al.

Source: PLoS Computational Biology. 7/20/2026, Vol. 22 Issue 7, p1-31. 31p.

The importance of nonsense errors: Estimating the rates and implications of ribosome drop-off during protein synthesis.

Authors: Cope, Alexander L. Pak, Denizhan Gilchrist, Michael A.

Source: PLoS Genetics. 6/9/2026, Vol. 22 Issue 6, p1-29. 29p.

Structural impacts of two disease-linked ADAR1 mutants: a molecular dynamics study.

Authors: Huang, Wen-Chieh Hsu, Chia-Hung Albu, Titus V. et al.

Source: Journal of Computer-Aided Molecular Design; 7/17/2024, Vol. 38 Issue 1, p1-12, 12p

Adar contributes to genome integrity by regulating R-loop homeostasis in Drosophila.

Authors: Zhang, Xuedi Liu, Hongyun Peng, Ju et al.

Source: BMC Biology. 7/15/2025, Vol. 23 Issue 1, p1-18. 18p.

Activation of PKR by a short-hairpin RNA.

Authors: Cottrell, Kyle A. Ryu, Sua Donelick, Helen et al.

Source: Scientific Reports. 10/12/2024, Vol. 14 Issue 1, p1-8. 8p.

Induction of viral mimicry upon loss of DHX9 and ADAR1 in breast cancer cells.

Authors: Cottrell KA Ryu S Torres LS et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2023 Oct 31. Date of Electronic Publication: 2023 Oct 31.

Publication Type: Preprint; Journal Article

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Improving deep models of protein-coding potential with a Fourier-transform architecture and machine translation task.

Authors: Valencia, Joseph D. Hendrix, David A.

Source: PLoS Computational Biology. 10/12/2023, Vol. 19 Issue 10, p1-30. 30p. 1 Color Photograph, 2 Diagrams, 1 Chart, 4 Graphs.

ADAR1-high tumor-associated macrophages induce drug resistance and are therapeutic targets in colorectal cancer.

Authors: Umeda, Hibiki Shigeyasu, Kunitoshi Takahashi, Toshiaki et al.

Source: Molecular Cancer. 4/16/2025, Vol. 24 Issue 1, p1-20. 20p.

Circular RNA circCLASP2 promotes nasopharyngeal carcinoma progression through binding to DHX9 to enhance PCMT1 translation.

Authors: Peng, Miao Zhang, Shanshan Wu, Pan et al.

Source: Molecular Cancer. 3/6/2025, Vol. 24 Issue 1, p1-25. 25p.

Increasing recombinant protein production in E. coli via FACS‐based selection of N‐terminal coding DNA libraries.

Authors: Herynek, Štěpán Svoboda, Jakub Huličiak, Maroš et al.

Source: FEBS Journal. Mar2025, Vol. 292 Issue 5, p1070-1085. 16p.

A human Staufen1 BAC transgenic mouse exhibits abnormal autophagy and neurodegeneration across the central nervous system.

Authors: Pulst SM Paul S Nguyen H et al.

Source: Cell death & disease [Cell Death Dis] 2026 May 14; Vol. 17 (1). Date of Electronic Publication: 2026 May 14.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101524092 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-4889 (Electronic) NLM ISO Abbreviation: Cell Death Dis Subsets: MEDLINE

When RNA goes off script: ensuring transcript fidelity in transgene expression.

Authors: Anderson R Ausler C Jain A

Source: The EMBO journal [EMBO J] 2026 Apr; Vol. 45 (8), pp. 2420-2432. Date of Electronic Publication: 2026 Mar 16.

Publication Type: Journal Article; Review

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8208664 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1460-2075 (Electronic) Linking ISSN: 02614189 NLM ISO Abbreviation: EMBO J Subsets: MEDLINE

The current landscape of mRNA therapy and the strategies for mRNA purification and dsRNA removal.

Authors: Liu JH Zang J Xu JR et al.

Source: Journal of biomedical science [J Biomed Sci] 2026 Jul 27; Vol. 33 (1). Date of Electronic Publication: 2026 Jul 27.

Publication Type: Journal Article; Review

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 9421567 Publication Model: Electronic Cited Medium: Internet ISSN: 1423-0127 (Electronic) Linking ISSN: 10217770 NLM ISO Abbreviation: J Biomed Sci Subsets: MEDLINE

DsRNA as pathogen-associated molecular pattern in innate immunity and multiple functions of the RNAi machinery complicate the use of RNAi in pest control.

Authors: Feng, Min Liu, Jisheng Wang, Luoluo et al.

Source: Frontiers in Insect Science. 2026, p1-22. 22p.

Bacterial gene 5′ ends have unusual mutation rates that can mislead tests of selection.

Authors: Radrizzani, Sofia Rivas-Santisteban, Juan Han, Namshik et al.

Source: PLoS Biology. 12/15/2025, Vol. 23 Issue 12, p1-42. 42p.

ADAR1-mediated RNA editing in breast cancer: molecular mechanisms and therapeutic implications.

Authors: Chen SY Yang S Li Y et al.

Source: Medical oncology (Northwood, London, England) [Med Oncol] 2025 Aug 09; Vol. 42 (9), pp. 421. Date of Electronic Publication: 2025 Aug 09.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer Country of Publication: United States NLM ID: 9435512 Publication Model: Electronic Cited Medium: Internet ISSN: 1559-131X (Electronic) Linking ISSN: 13570560 NLM ISO Abbreviation: Med Oncol Subsets: MEDLINE

Expression of ABC transporters negatively correlates with ectoine biosynthesis in Halomonas campaniensis under NaCl and ultraviolet mutagenesis treatments revealed by transcriptomic and proteomics combined analysis.

Authors: Qiao, Lijuan Shen, Guoping Han, Rui et al.

Source: BMC Genomics. 11/20/2024, Vol. 25 Issue 1, p1-13. 13p.

Immune cell annotation in the single-cell studies: technologies, challenges, and integrative solutions.

Authors: George S Johdi NA

Source: Immunologic research [Immunol Res] 2026 May 01; Vol. 74 (1). Date of Electronic Publication: 2026 May 01.

Publication Type: Journal Article; Review

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 8611087 Publication Model: Electronic Cited Medium: Internet ISSN: 1559-0755 (Electronic) Linking ISSN: 0257277X NLM ISO Abbreviation: Immunol Res Subsets: MEDLINE

The competitive landscape of the dsRNA world.

Authors: Cottrell KA Andrews RJ Bass BL

Source: Molecular cell [Mol Cell] 2024 Jan 04; Vol. 84 (1), pp. 107-119. Date of Electronic Publication: 2023 Dec 19.

Publication Type: Journal Article; Review; Research Support, N.I.H., Extramural

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 9802571 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4164 (Electronic) Linking ISSN: 10972765 NLM ISO Abbreviation: Mol Cell Subsets: MEDLINE