Search Results - "Database Management Systems"

A Unified Database for a Set of Clinical Studies on the Treatment of Bacterial and Fungal Infections Within the MULTI-SITA Project.

Authors: Antola S Gallone S Murgia Y et al.

Source: Studies in health technology and informatics [Stud Health Technol Inform] 2026 May 21; Vol. 336, pp. 1880-1884.

Publication Type: Journal Article

Journal Info: Publisher: IOS Press Country of Publication: Netherlands NLM ID: 9214582 Publication Model: Print Cited Medium: Internet ISSN: 1879-8365 (Electronic) Linking ISSN: 09269630 NLM ISO Abbreviation: Stud Health Technol Inform Subsets: MEDLINE

Towards FAIR and federated data ecosystems for interdisciplinary research.

Authors: Beyvers S Schlegel J Brehm L et al.

Source: PLoS computational biology [PLoS Comput Biol] 2026 Feb 13; Vol. 22 (2), pp. e1013806. Date of Electronic Publication: 2026 Feb 13 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

AntigenApp: a laboratory data management system for nanobody generation and sequence analysis.

Authors: Lubbock ALR Eyssen LE Parker K et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2025 Dec 01; Vol. 41 (12).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Characteristics of cohort data management systems (CDMS): a scoping review.

Authors: Abasi A Ayatollahi H Motevalian SA

Source: BMC medical research methodology [BMC Med Res Methodol] 2025 Nov 14; Vol. 25 (1), pp. 256. Date of Electronic Publication: 2025 Nov 14.

Publication Type: Journal Article; Scoping Review

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100968545 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2288 (Electronic) Linking ISSN: 14712288 NLM ISO Abbreviation: BMC Med Res Methodol Subsets: MEDLINE

PloverDB: a high-performance platform for serving biomedical knowledge graphs as standards-compliant web APIs.

Authors: Glen AK Deutsch EW Ramsey SA

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2025 Jul 01; Vol. 41 (7).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Introducing the Database Schema Handling FHIR Data in the INTERPOLAR Project.

Authors: Reusche M Stäubert S Strübing A et al.

Source: Studies in health technology and informatics [Stud Health Technol Inform] 2025 May 15; Vol. 327, pp. 767-768.

Publication Type: Journal Article

Journal Info: Publisher: IOS Press Country of Publication: Netherlands NLM ID: 9214582 Publication Model: Print Cited Medium: Internet ISSN: 1879-8365 (Electronic) Linking ISSN: 09269630 NLM ISO Abbreviation: Stud Health Technol Inform Subsets: MEDLINE

Omilayers: a Python package for efficient data management to support multi-omic analysis.

Authors: Kioroglou D; Integrative Genomics Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, Basque Country, Spain. dkioroglou@cicbiogune.es.

Source: BMC bioinformatics [BMC Bioinformatics] 2025 Feb 06; Vol. 26 (1), pp. 40. Date of Electronic Publication: 2025 Feb 06.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

Snowflake Data Warehouse for Large-Scale and Diverse Biological Data Management and Analysis.

Authors: Koreeda T Honda H Onami JI

Source: Genes [Genes (Basel)] 2024 Dec 28; Vol. 16 (1). Date of Electronic Publication: 2024 Dec 28.

Publication Type: Journal Article; Review

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101551097 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4425 (Electronic) Linking ISSN: 20734425 NLM ISO Abbreviation: Genes (Basel) Subsets: MEDLINE

EpiCore-A Common Data Model for Pharmacoepidemiological Studies in Denmark, Norway, and Sweden.

Authors: Jensen PB Andersen JH Ernst MT et al.

Source: Pharmacoepidemiology and drug safety [Pharmacoepidemiol Drug Saf] 2025 Nov; Vol. 34 (11), pp. e70241.

Publication Type: Journal Article

Journal Info: Publisher: Wiley Country of Publication: England NLM ID: 9208369 Publication Model: Print Cited Medium: Internet ISSN: 1099-1557 (Electronic) Linking ISSN: 10538569 NLM ISO Abbreviation: Pharmacoepidemiol Drug Saf Subsets: MEDLINE

An open-source SQL database schema for integrated clinical and translational data management in clinical trials.

Authors: Niazi U Stuart C Soares P et al.

Source: Clinical trials (London, England) [Clin Trials] 2025 Jun; Vol. 22 (3), pp. 374-377. Date of Electronic Publication: 2024 Dec 25.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: SAGE Publications Country of Publication: England NLM ID: 101197451 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1740-7753 (Electronic) Linking ISSN: 17407745 NLM ISO Abbreviation: Clin Trials Subsets: MEDLINE

Relational Database-Based Resource-Provenance Visualization Engine: with an application to BICAN data.

Authors: Li X Huang Y Ng L et al.

Source: AMIA ... Annual Symposium proceedings. AMIA Symposium [AMIA Annu Symp Proc] 2025 May 22; Vol. 2024, pp. 754-763. Date of Electronic Publication: 2025 May 22 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: American Medical Informatics Association Country of Publication: United States NLM ID: 101209213 Publication Model: eCollection Cited Medium: Internet ISSN: 1942-597X (Electronic) Linking ISSN: 15594076 NLM ISO Abbreviation: AMIA Annu Symp Proc Subsets: MEDLINE

The importance of graph databases and graph learning for clinical applications.

Authors: Walke D Micheel D Schallert K et al.

Source: Database : the journal of biological databases and curation [Database (Oxford)] 2023 Jul 10; Vol. 2023.

Publication Type: Review; Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford Journals Country of Publication: England NLM ID: 101517697 Publication Model: Print Cited Medium: Internet ISSN: 1758-0463 (Electronic) Linking ISSN: 17580463 NLM ISO Abbreviation: Database (Oxford) Subsets: MEDLINE

A Novel Edge-Based Trust Management System for the Smart City Environment Using Eigenvector Analysis.

Authors: Nagarajan G Simpson SV Venkatachalam K et al.

Source: Journal of healthcare engineering [J Healthc Eng] 2022 May 26; Vol. 2022, pp. 5625897. Date of Electronic Publication: 2022 May 26 (Print Publication: 2022).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Hindawi Publishing Country of Publication: England NLM ID: 101528166 Publication Model: eCollection Cited Medium: Internet ISSN: 2040-2309 (Electronic) Linking ISSN: 20402295 NLM ISO Abbreviation: J Healthc Eng Subsets: MEDLINE

Practical implications of using non-relational databases to store large genomic data files and novel phenotypes.

Authors: Moreira Souza A Weigert RAS Machado de Sousa EP et al.

Source: Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie [J Anim Breed Genet] 2022 Jan; Vol. 139 (1), pp. 100-112. Date of Electronic Publication: 2021 Aug 29.

Publication Type: Journal Article

Journal Info: Publisher: Blackwell Country of Publication: Germany NLM ID: 100955807 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1439-0388 (Electronic) Linking ISSN: 09312668 NLM ISO Abbreviation: J Anim Breed Genet Subsets: MEDLINE

Design and development of human resource management computer system for enterprise employees.

Authors: Wang T Li N Li H

Source: PloS one [PLoS One] 2021 Dec 17; Vol. 16 (12), pp. e0261594. Date of Electronic Publication: 2021 Dec 17 (Print Publication: 2021).

Publication Type: Journal Article; Retracted Publication

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

RESCRIPt: Reproducible sequence taxonomy reference database management.

Authors: Robeson MS 2nd O'Rourke DR Kaehler BD et al.

Source: PLoS computational biology [PLoS Comput Biol] 2021 Nov 08; Vol. 17 (11), pp. e1009581. Date of Electronic Publication: 2021 Nov 08 (Print Publication: 2021).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

GigaDB: a redesigned repository for data publishing and management.

Authors: Li X Hua C Yue Q et al.

Source: GigaScience [Gigascience] 2026 Jan 21; Vol. 15.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 101596872 Publication Model: Print Cited Medium: Internet ISSN: 2047-217X (Electronic) Linking ISSN: 2047217X NLM ISO Abbreviation: Gigascience Subsets: MEDLINE

An overview of graph databases and their applications in the biomedical domain.

Authors: Timón-Reina S Rincón M Martínez-Tomás R

Source: Database : the journal of biological databases and curation [Database (Oxford)] 2021 May 18; Vol. 2021.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford Journals Country of Publication: England NLM ID: 101517697 Publication Model: Print Cited Medium: Internet ISSN: 1758-0463 (Electronic) Linking ISSN: 17580463 NLM ISO Abbreviation: Database (Oxford) Subsets: MEDLINE

VirusCircBase: a database of virus circular RNAs.

Authors: Cai Z Fan Y Zhang Z et al.

Source: Briefings in bioinformatics [Brief Bioinform] 2021 Mar 22; Vol. 22 (2), pp. 2182-2190.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief Bioinform Subsets: MEDLINE

PDB-tools web: A user-friendly interface for the manipulation of PDB files.

Authors: Jiménez-García B Teixeira JMC Trellet M et al.

Source: Proteins [Proteins] 2021 Mar; Vol. 89 (3), pp. 330-335. Date of Electronic Publication: 2020 Nov 07.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-Liss Country of Publication: United States NLM ID: 8700181 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0134 (Electronic) Linking ISSN: 08873585 NLM ISO Abbreviation: Proteins Subsets: MEDLINE