Search Results - "Grethe JS"

Improving Data Quality in Neurotrauma Data Sharing: The Open Data Commons Minimal Data Standards and a Data Tool for Compliance.

Authors: Fond KA Radabaugh H Vavrek R et al.

Corporate Authors: Fond KA Radabaugh H Vavrek R et al.

Source: Journal of neurotrauma [J Neurotrauma] 2026 May 19, pp. 8977151261449699. Date of Electronic Publication: 2026 May 19.

Publication Type: Journal Article

Journal Info: Publisher: Mary Ann Liebert Country of Publication: United States NLM ID: 8811626 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1557-9042 (Electronic) Linking ISSN: 08977151 NLM ISO Abbreviation: J Neurotrauma Subsets: MEDLINE

Do organisms need an impact factor? Citations of key biological resources including model organisms reveal usage patterns and impact.

Authors: Piekniewska A Roelandse M Lloyd KCK et al.

Source: PloS one [PLoS One] 2025 Aug 13; Vol. 20 (8), pp. e0327344. Date of Electronic Publication: 2025 Aug 13 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

The Common Fund Data Ecosystem (CFDE).

Authors: Jurgens JA Bueckle A Vora J et al.

Corporate Authors: Jurgens JA Bueckle A Vora J et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 Apr 16. Date of Electronic Publication: 2026 Apr 16.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

PRECISE TBI Model Catalog: Increasing Accessibility and Reproducibility in TBI research.

Authors: Surles-Zeigler MC Holmes L Sincomb T et al.

Corporate Authors: Surles-Zeigler MC Holmes L Sincomb T et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 Feb 12. Date of Electronic Publication: 2026 Feb 12.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

The Data Distillery: A Graph Framework for Semantic Integration and Querying of Biomedical Data.

Authors: Ahooyi TM Stear B Simmons JA et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Oct 16. Date of Electronic Publication: 2025 Oct 16.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

A Community Effort to Develop Common Data Elements for Pre-Clinical Spinal Cord Injury Research.

Authors: Fedor BA Torres-Espin A Vavrek R et al.

Corporate Authors: Fedor BA Torres-Espin A Vavrek R et al.

Source: Neurotrauma reports [Neurotrauma Rep] 2025 Apr 28; Vol. 6 (1), pp. 391-401. Date of Electronic Publication: 2025 Apr 28 (Print Publication: 2025).

Publication Type: Journal Article; Review

Journal Info: Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101773091 Publication Model: eCollection Cited Medium: Internet ISSN: 2689-288X (Electronic) Linking ISSN: 2689288X NLM ISO Abbreviation: Neurotrauma Rep Subsets: In Process

Developing a multiscale neural connectivity knowledgebase of the autonomic nervous system.

Authors: Imam FT Gillespie TH Ziogas I et al.

Source: Frontiers in neuroinformatics [Front Neuroinform] 2025 Mar 14; Vol. 19, pp. 1541184. Date of Electronic Publication: 2025 Mar 14 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101477957 Publication Model: eCollection Cited Medium: Print ISSN: 1662-5196 (Print) Linking ISSN: 16625196 NLM ISO Abbreviation: Front Neuroinform Subsets: PubMed not MEDLINE

Data reporting quality and semantic interoperability increase with community-based data elements (CoDEs). Analysis of the open data commons for spinal cord injury (ODC-SCI).

Authors: Sheoran A Fond KA Davis LM et al.

Source: Experimental neurology [Exp Neurol] 2025 Mar; Vol. 385, pp. 115100. Date of Electronic Publication: 2024 Dec 07.

Publication Type: Journal Article

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 0370712 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1090-2430 (Electronic) Linking ISSN: 00144886 NLM ISO Abbreviation: Exp Neurol Subsets: MEDLINE

An infrastructure for qualified data sharing and team science in late-stage translational spinal cord injury research.

Authors: Huie JR Torres-Espin A Sacramento J et al.

Source: Experimental neurology [Exp Neurol] 2025 Jan; Vol. 383, pp. 114995. Date of Electronic Publication: 2024 Oct 10.

Publication Type: Journal Article; Review

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 0370712 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1090-2430 (Electronic) Linking ISSN: 00144886 NLM ISO Abbreviation: Exp Neurol Subsets: MEDLINE

Developing a Multiscale Neural Connectivity Knowledgebase of the Autonomic Nervous System.

Authors: Imam FT Gillespie TH Ziogas I et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Nov 28. Date of Electronic Publication: 2024 Nov 28.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Representing Normal and Abnormal Physiology as Routes of Flow in ApiNATOMY.

Authors: de Bono B Gillespie T Surles-Zeigler MC et al.

Source: Frontiers in physiology [Front Physiol] 2022 Apr 25; Vol. 13, pp. 795303. Date of Electronic Publication: 2022 Apr 25 (Print Publication: 2022).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101549006 Publication Model: eCollection Cited Medium: Print ISSN: 1664-042X (Print) Linking ISSN: 1664042X NLM ISO Abbreviation: Front Physiol Subsets: PubMed not MEDLINE

A practical guide to data management and sharing for biomedical laboratory researchers.

Authors: Fouad K Vavrek R Surles-Zeigler MC et al.

Source: Experimental neurology [Exp Neurol] 2024 Aug; Vol. 378, pp. 114815. Date of Electronic Publication: 2024 May 16.

Publication Type: Journal Article

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 0370712 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1090-2430 (Electronic) Linking ISSN: 00144886 NLM ISO Abbreviation: Exp Neurol Subsets: MEDLINE

The SPARC DRC: Building a Resource for the Autonomic Nervous System Community.

Authors: Osanlouy M Bandrowski A de Bono B et al.

Source: Frontiers in physiology [Front Physiol] 2021 Jun 24; Vol. 12, pp. 693735. Date of Electronic Publication: 2021 Jun 24 (Print Publication: 2021).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101549006 Publication Model: eCollection Cited Medium: Print ISSN: 1664-042X (Print) Linking ISSN: 1664042X NLM ISO Abbreviation: Front Physiol Subsets: PubMed not MEDLINE

Antibody Watch: Text mining antibody specificity from the literature.

Authors: Hsu CN Chang CH Poopradubsil T et al.

Source: PLoS computational biology [PLoS Comput Biol] 2021 May 27; Vol. 17 (5), pp. e1008967. Date of Electronic Publication: 2021 May 27 (Print Publication: 2021).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Do organisms need an impact factor? Citations of key biological resources including model organisms reveal usage patterns and impact.

Authors: Piekniewska A Anderson N Roelandse M et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Jan 16. Date of Electronic Publication: 2024 Jan 16.

Publication Type: Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Bio-AnswerFinder: a system to find answers to questions from biomedical texts.

Authors: Ozyurt IB Bandrowski A Grethe JS

Source: Database : the journal of biological databases and curation [Database (Oxford)] 2020 Jan 01; Vol. 2020.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford Journals Country of Publication: England NLM ID: 101517697 Publication Model: Print Cited Medium: Internet ISSN: 1758-0463 (Electronic) Linking ISSN: 17580463 NLM ISO Abbreviation: Database (Oxford) Subsets: MEDLINE

NIDM-Terms: community-based terminology management for improved neuroimaging dataset descriptions and query.

Authors: Queder N Tien VB Abraham SA et al.

Source: Frontiers in neuroinformatics [Front Neuroinform] 2023 Jul 18; Vol. 17, pp. 1174156. Date of Electronic Publication: 2023 Jul 18 (Print Publication: 2023).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101477957 Publication Model: eCollection Cited Medium: Print ISSN: 1662-5196 (Print) Linking ISSN: 16625196 NLM ISO Abbreviation: Front Neuroinform Subsets: PubMed not MEDLINE

Toxicology knowledge graph for structural birth defects.

Authors: Evangelista JE Clarke DJB Xie Z et al.

Source: Communications medicine [Commun Med (Lond)] 2023 Jul 17; Vol. 3 (1), pp. 98. Date of Electronic Publication: 2023 Jul 17.

Publication Type: Journal Article

Journal Info: Publisher: Nature Portfolio Country of Publication: England NLM ID: 9918250414506676 Publication Model: Electronic Cited Medium: Internet ISSN: 2730-664X (Electronic) Linking ISSN: 2730664X NLM ISO Abbreviation: Commun Med (Lond) Subsets: PubMed not MEDLINE

A data citation roadmap for scholarly data repositories.

Authors: Fenner M Crosas M Grethe JS et al.

Source: Scientific data [Sci Data] 2019 Apr 10; Vol. 6 (1), pp. 28. Date of Electronic Publication: 2019 Apr 10.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Addendum: The FAIR Guiding Principles for scientific data management and stewardship.

Authors: Wilkinson MD Dumontier M Jan Aalbersberg I et al.

Source: Scientific data [Sci Data] 2019 Mar 19; Vol. 6 (1), pp. 6. Date of Electronic Publication: 2019 Mar 19.

Publication Type: Journal Article; Published Erratum

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: PubMed not MEDLINE