Search Results - "Haliloglu T"

Memorization bias impacts modeling of alternative conformational states of solute carrier membrane proteins with methods from deep learning.

Authors: Swapna, G.V.T. Dube, Namita Roth, Monica J. et al.

Source: PLoS Computational Biology. 10/17/2025, Vol. 21 Issue 10, p1-19. 19p.

Deciphering Allosteric Disease Mutations Through Intrinsic Dynamics.

Authors: Kaskaloglu B Duman O Kutlu Y et al.

Source: Journal of molecular biology [J Mol Biol] 2025 Oct 15; Vol. 437 (20), pp. 169326. Date of Electronic Publication: 2025 Jul 04.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

Scale-Hopping in Computer Simulations of Polymers # #The author of this review has agreed to write a short follow-up to this article that will incorporate information provided by the readers. If you have comments, additions, clarifications, or remarks concerning this article, please send them to the author within 3 months after this article has appeared. The author will review them and collect them into a feedback article, which will appear in one of the coming issues of Soft Materials.

Authors: Müller-Plathe, Florian¹ (AUTHOR) Florian.Mueller-Plathe@mpip-mainz.mpg.de

Source: Soft Materials. 2003, Vol. 1 Issue 1, p1-31. 31p.

Network Topology and Interactomic Analysis Reveal the Regulatory Framework of the Humanin Protein Family (MTRNR2Lx Class).

Authors: Shahzaib, Mohd Aprile, Domenico Laporta, Gianluigi et al.

Source: Biomolecules (2218-273X). Jul2026, Vol. 16 Issue 7, p981. 40p.

Structural Features of a Tiny Viral Protein, ORF7b of SARS-CoV-2.

Authors: Colonna, Giovanni¹ (AUTHOR)

Source: International Journal of Molecular Sciences. Jul2026, Vol. 27 Issue 13, p6022. 42p.

From Cognitive Agents to Cognitive Systems: Theoretical, Methodological, and Empirical Developments of van Gelder's (1998) "Dynamical Hypothesis".

Authors: Nguyen, Tri D. Magaldino, Corey M. Landfair, Jayci T. et al.

Source: Topics in Cognitive Science. Jul2026, Vol. 18 Issue 3, p1-19. 19p.

A Universal Structural Grammar in Enzyme Fold for Predicting Drug Target Stability: Deciphering Directional Scaffolding via Multi-Stage Pearson Correlation of Asymmetric Contact Matrices.

Authors: Jannus, Fatin Ramírez-Rodrigo, Hilario

Source: Pharmaceutics. Jun2026, Vol. 18 Issue 6, p728. 30p.

Dynamic Behavior of Catalysts Under Operating Conditions: Part 1—Origin and Development of the Ideas †.

Authors: Mironenko, Roman M. Likholobov, Vladimir A. Lavrenov, Aleksandr V.

Source: Chemistry (2624-8549). Jun2026, Vol. 8 Issue 6, p79. 45p.

An in silico approach to peptide-based dual-receptor targeting for IL13RA2 and VEGFR-2 extracellular domain.

Authors: Islam S Cutter LR Biggs MA et al.

Source: Journal of molecular modeling [J Mol Model] 2026 Jan 06; Vol. 32 (1), pp. 35. Date of Electronic Publication: 2026 Jan 06.

Publication Type: Journal Article

Journal Info: Publisher: Springer Country of Publication: Germany NLM ID: 9806569 Publication Model: Electronic Cited Medium: Internet ISSN: 0948-5023 (Electronic) Linking ISSN: 09485023 NLM ISO Abbreviation: J Mol Model Subsets: MEDLINE

OPUS-BFactor: Predicting Protein B-Factor with Sequence and Structure Information.

Authors: Yang, Yulu Lv, Ying Luo, Zhenwei et al.

Source: Molecules. Jun2025, Vol. 30 Issue 12, p2570. 13p.

A missense variant at the RAC1-PAK1 binding site of RAC1 inactivates downstream signaling in VACTERL association.

Authors: Seyama, Rie Nishikawa, Masashi Uchiyama, Yuri et al.

Source: Scientific Reports. 6/16/2023, Vol. 13 Issue 1, p1-11. 11p.

Prediction of Temperature Factors in Proteins: Effect of Data Pre-Processing and Experimental Conditions.

Authors: Pražnikar, Jure^1,2

Source: Crystals (2073-4352); May2025, Vol. 15 Issue 5, p455, 15p

Leveraging AAV1-Rac1T17N to prevent experimental proliferative vitreoretinopathy.

Authors: Li, Duo Linghu, Minli Tang, Jisen et al.

Source: Journal of Translational Medicine. 3/26/2025, Vol. 23 Issue 1, p1-14. 14p.

Enzyme Catalytic Parameters and Evolution Across the Dissipation Plane.

Authors: Juretić, Davor Bruvo Mađarić, Branka

Source: International Journal of Molecular Sciences. Feb2026, Vol. 27 Issue 4, p1709. 27p.

Human CTR1 Through the Ages: Milestones and Emerging Roles in Disease and Therapy.

Authors: Peleg, Shahaf Hofmann, Lukas Ruthstein, Sharon

Source: Biomolecules (2218-273X). Dec2025, Vol. 15 Issue 12, p1739. 33p.

RAC1 -Amplified and RAC1 -A159V Hotspot-Mutated Head and Neck Cancer Sensitive to the Rac Inhibitor EHop-016 In Vivo: A Proof-of-Concept Study.

Authors: Chan, Helen Hoi Yin Ngan, Hoi-Lam Ng, Yuen-Keng et al.

Source: Cancers. Feb2025, Vol. 17 Issue 3, p361. 28p.

Organic Synthesis and Current Understanding of the Mechanisms of CFTR Modulator Drugs Ivacaftor, Tezacaftor, and Elexacaftor.

Authors: Ferreira, Filipa C. Buarque, Camilla D. Lopes-Pacheco, Miquéias

Source: Molecules. Feb2024, Vol. 29 Issue 4, p821. 34p.

Total Anatomical Nasal Skeletal Reconstruction Using a New Autologous Graft: The Tent Shaped Fibular Contoured Bone Graft.

Authors: Agarwal D Agarwal R

Source: Aesthetic plastic surgery [Aesthetic Plast Surg] 2025 Aug; Vol. 49 (15), pp. 4238-4246. Date of Electronic Publication: 2025 Feb 24.

Publication Type: Journal Article

Journal Info: Publisher: Springer-Verlag Country of Publication: United States NLM ID: 7701756 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-5241 (Electronic) Linking ISSN: 0364216X NLM ISO Abbreviation: Aesthetic Plast Surg Subsets: MEDLINE

Elucidating the Substrate Envelope of Enterovirus 68-3C Protease: Structural Basis of Specificity and Potential Resistance.

Authors: Azzolino, Vincent N. Shaqra, Ala M. Ali, Akbar et al.

Source: Viruses (1999-4915). Sep2024, Vol. 16 Issue 9, p1419. 17p.

Rho Small GTPase Family in Androgen-Regulated Prostate Cancer Progression and Metastasis.

Authors: Hairston, Dontrel William Spencer Mudryj, Maria Ghosh, Paramita Mitra

Source: Cancers. Nov2025, Vol. 17 Issue 22, p3680. 35p.