Search Results - "Hoop CL"

Spectroscopic method for measuring activity of cis-aconitate decarboxylase, an important metabolic regulator of immune responses.

Authors: Knowlan K Hoop CL Tarasova NI

Source: Analytical biochemistry [Anal Biochem] 2025 Nov; Vol. 706, pp. 115944. Date of Electronic Publication: 2025 Jul 11.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: United States NLM ID: 0370535 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-0309 (Electronic) Linking ISSN: 00032697 NLM ISO Abbreviation: Anal Biochem Subsets: MEDLINE

Novel GPU Engines for Virtual Screening of Giga-Sized Libraries Identify Inhibitors of Challenging Targets.

Authors: Raush E Totrov M Hoop CL et al.

Source: Journal of chemical information and modeling [J Chem Inf Model] 2025 Oct 13; Vol. 65 (19), pp. 10253-10268. Date of Electronic Publication: 2025 Sep 17.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101230060 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1549-960X (Electronic) Linking ISSN: 15499596 NLM ISO Abbreviation: J Chem Inf Model Subsets: MEDLINE

Nanoscale Structural and Functional Impacts of Disease-Associated Collagen Mutations.

Authors: Tobita CA Banerjee S Roth J et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Sep 04. Date of Electronic Publication: 2025 Sep 04.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Virtual screening of ultra-large chemical libraries identifies cell-permeable small-molecule inhibitors of a "non-druggable" target, STAT3 N-terminal domain.

Authors: Bonilla PA Hoop CL Stefanisko K et al.

Source: Frontiers in oncology [Front Oncol] 2023 Apr 25; Vol. 13, pp. 1144153. Date of Electronic Publication: 2023 Apr 25 (Print Publication: 2023).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101568867 Publication Model: eCollection Cited Medium: Print ISSN: 2234-943X (Print) Linking ISSN: 2234943X NLM ISO Abbreviation: Front Oncol Subsets: PubMed not MEDLINE

Probing the effect of glycosaminoglycan depletion on integrin interactions with collagen I fibrils in the native extracellular matrix environment.

Authors: Roth J Hoop CL Williams JK et al.

Source: Protein science : a publication of the Protein Society [Protein Sci] 2023 Jan; Vol. 32 (1), pp. e4508.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print Cited Medium: Internet ISSN: 1469-896X (Electronic) Linking ISSN: 09618368 NLM ISO Abbreviation: Protein Sci Subsets: MEDLINE

Molecular dynamics analysis of a flexible loop at the binding interface of the SARS-CoV-2 spike protein receptor-binding domain.

Authors: Williams JK Wang B Sam A et al.

Source: Proteins [Proteins] 2022 May; Vol. 90 (5), pp. 1044-1053. Date of Electronic Publication: 2021 Aug 23.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Wiley-Liss Country of Publication: United States NLM ID: 8700181 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0134 (Electronic) Linking ISSN: 08873585 NLM ISO Abbreviation: Proteins Subsets: MEDLINE

CD36-Binding Amphiphilic Nanoparticles for Attenuation of Alpha Synuclein-Induced Microglial Activation.

Authors: Zhao N Francis NL Song S et al.

Source: Advanced nanobiomed research [Adv Nanobiomed Res] 2022 Jun; Vol. 2 (6). Date of Electronic Publication: 2022 Mar 22.

Publication Type: Journal Article

Journal Info: Publisher: Wiley-VCH GmbH Country of Publication: Germany NLM ID: 101773117 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2699-9307 (Electronic) Linking ISSN: 26999307 NLM ISO Abbreviation: Adv Nanobiomed Res Subsets: PubMed not MEDLINE

DJ-1 Acts as a Scavenger of α-Synuclein Oligomers and Restores Monomeric Glycated α-Synuclein.

Authors: Atieh TB Roth J Yang X et al.

Source: Biomolecules [Biomolecules] 2021 Oct 06; Vol. 11 (10). Date of Electronic Publication: 2021 Oct 06.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101596414 Publication Model: Electronic Cited Medium: Internet ISSN: 2218-273X (Electronic) Linking ISSN: 2218273X NLM ISO Abbreviation: Biomolecules Subsets: MEDLINE

NMR unveils an N-terminal interaction interface on acetylated-α-synuclein monomers for recruitment to fibrils.

Authors: Yang X Wang B Hoop CL et al.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2021 May 04; Vol. 118 (18).

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

Collagen I Weakly Interacts with the β-Sheets of β2-Microglobulin and Enhances Conformational Exchange To Induce Amyloid Formation.

Authors: Hoop CL Zhu J Bhattacharya S et al.

Source: Journal of the American Chemical Society [J Am Chem Soc] 2020 Jan 22; Vol. 142 (3), pp. 1321-1331. Date of Electronic Publication: 2020 Jan 08.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 7503056 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-5126 (Electronic) Linking ISSN: 00027863 NLM ISO Abbreviation: J Am Chem Soc Subsets: MEDLINE

PET-RAFT and SAXS: High Throughput Tools to Study Compactness and Flexibility of Single-Chain Polymer Nanoparticles.

Authors: Upadhya R Murthy NS Hoop CL et al.

Source: Macromolecules [Macromolecules] 2019 Nov 12; Vol. 52 (21), pp. 8295-8304. Date of Electronic Publication: 2019 Oct 25.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 0365316 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0024-9297 (Print) Linking ISSN: 00249297 NLM ISO Abbreviation: Macromolecules Subsets: PubMed not MEDLINE

Molecular underpinnings of integrin binding to collagen-mimetic peptides containing vascular Ehlers-Danlos syndrome-associated substitutions.

Authors: Hoop CL Kemraj AP Wang B et al.

Source: The Journal of biological chemistry [J Biol Chem] 2019 Sep 27; Vol. 294 (39), pp. 14442-14453. Date of Electronic Publication: 2019 Aug 12.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 2985121R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1083-351X (Electronic) Linking ISSN: 00219258 NLM ISO Abbreviation: J Biol Chem Subsets: MEDLINE

Extracellular matrix components modulate different stages in β2-microglobulin amyloid formation.

Authors: Benseny-Cases N Karamanos TK Hoop CL et al.

Source: The Journal of biological chemistry [J Biol Chem] 2019 Jun 14; Vol. 294 (24), pp. 9392-9401. Date of Electronic Publication: 2019 Apr 17.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 2985121R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1083-351X (Electronic) Linking ISSN: 00219258 NLM ISO Abbreviation: J Biol Chem Subsets: MEDLINE

Cryptic binding sites become accessible through surface reconstruction of the type I collagen fibril.

Authors: Zhu J Hoop CL Case DA et al.

Source: Scientific reports [Sci Rep] 2018 Nov 09; Vol. 8 (1), pp. 16646. Date of Electronic Publication: 2018 Nov 09.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

Revealing Accessibility of Cryptic Protein Binding Sites within the Functional Collagen Fibril.

Authors: Hoop CL Zhu J Nunes AM et al.

Source: Biomolecules [Biomolecules] 2017 Nov 01; Vol. 7 (4). Date of Electronic Publication: 2017 Nov 01.

Publication Type: Journal Article; Review; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101596414 Publication Model: Electronic Cited Medium: Internet ISSN: 2218-273X (Electronic) Linking ISSN: 2218273X NLM ISO Abbreviation: Biomolecules Subsets: MEDLINE

Backbone Engineering within a Latent β-Hairpin Structure to Design Inhibitors of Polyglutamine Amyloid Formation.

Authors: Kar K Baker MA Lengyel GA et al.

Source: Journal of molecular biology [J Mol Biol] 2017 Jan 20; Vol. 429 (2), pp. 308-323. Date of Electronic Publication: 2016 Dec 13.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

Huntingtin exon 1 fibrils feature an interdigitated β-hairpin-based polyglutamine core.

Authors: Hoop CL Lin HK Kar K et al.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2016 Feb 09; Vol. 113 (6), pp. 1546-51. Date of Electronic Publication: 2016 Feb 01.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

Structural Changes and Proapoptotic Peroxidase Activity of Cardiolipin-Bound Mitochondrial Cytochrome c.

Authors: Mandal A Hoop CL DeLucia M et al.

Source: Biophysical journal [Biophys J] 2015 Nov 03; Vol. 109 (9), pp. 1873-84.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 0370626 Publication Model: Print Cited Medium: Internet ISSN: 1542-0086 (Electronic) Linking ISSN: 00063495 NLM ISO Abbreviation: Biophys J Subsets: MEDLINE

Polyglutamine amyloid core boundaries and flanking domain dynamics in huntingtin fragment fibrils determined by solid-state nuclear magnetic resonance.

Authors: Hoop CL Lin HK Kar K et al.

Source: Biochemistry [Biochemistry] 2014 Oct 28; Vol. 53 (42), pp. 6653-66. Date of Electronic Publication: 2014 Oct 16.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 0370623 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-4995 (Electronic) Linking ISSN: 00062960 NLM ISO Abbreviation: Biochemistry Subsets: MEDLINE

13C chemical-shift anisotropy of alkyl-substituted aromatic carbon in anthracene derivatives.

Authors: Hoop CL Iuliucci RJ

Source: Solid state nuclear magnetic resonance [Solid State Nucl Magn Reson] 2013 Jun; Vol. 53, pp. 1-12. Date of Electronic Publication: 2013 Feb 13.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 9306181 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1527-3326 (Electronic) Linking ISSN: 09262040 NLM ISO Abbreviation: Solid State Nucl Magn Reson Subsets: PubMed not MEDLINE