Search Results - "Interaction"

Node properties of biomarkers within the protein-protein interaction network derived from breast cancer-associated genes.

Authors: Sasaki T Torii S

Source: PloS one [PLoS One] 2026 May 06; Vol. 21 (5), pp. e0347551. Date of Electronic Publication: 2026 May 06 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

A network-centric approach reveals novel pathways impacted by Prader-Willi Syndrome.

Authors: Bham K Anandakrishnan M Wu CH et al.

Source: PloS one [PLoS One] 2026 Apr 28; Vol. 21 (4), pp. e0347773. Date of Electronic Publication: 2026 Apr 28 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Predicting the protein interaction landscape of a free-living bacterium with pooled-AlphaFold3.

Authors: Todor H Kim LM Jänes J et al.

Source: Molecular systems biology [Mol Syst Biol] 2026 Apr; Vol. 22 (4), pp. 497-518. Date of Electronic Publication: 2026 Jan 20.

Publication Type: Journal Article

Journal Info: Publisher: EMBO Press Country of Publication: Germany NLM ID: 101235389 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1744-4292 (Electronic) Linking ISSN: 17444292 NLM ISO Abbreviation: Mol Syst Biol Subsets: MEDLINE

A predicted structural interactome reveals binding interference from intrinsically disordered regions.

Authors: Peng J Zhao L

Source: PLoS computational biology [PLoS Comput Biol] 2026 Jan 22; Vol. 22 (1), pp. e1013899. Date of Electronic Publication: 2026 Jan 22 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Integrating endogenous TurboID and data-independent acquisition mass spectrometry for in vivo proximity labeling.

Authors: Fay DS Balasubramaniam B Harrington SM et al.

Source: The EMBO journal [EMBO J] 2026 Jan; Vol. 45 (2), pp. 592-632. Date of Electronic Publication: 2025 Dec 11.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8208664 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1460-2075 (Electronic) Linking ISSN: 02614189 NLM ISO Abbreviation: EMBO J Subsets: MEDLINE

Cysteine-enabled cleavability to advance cross-linking mass spectrometry for global analysis of endogenous protein-protein interactions.

Authors: Jiao F Braitbard M Yu C et al.

Source: Nature communications [Nat Commun] 2025 Dec 12; Vol. 16 (1), pp. 11093. Date of Electronic Publication: 2025 Dec 12.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Towards a phylogenetically informed approach to solving protein-protein interactions.

Authors: Lim CS Mace P Fineran PC et al.

Source: Biochemical Society transactions [Biochem Soc Trans] 2025 Dec 03; Vol. 53 (6). Date of Electronic Publication: 2025 Dec 03.

Publication Type: Journal Article; Review; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Portland Press On The Behalf Of The Biochemical Society Country of Publication: England NLM ID: 7506897 Publication Model: Electronic Cited Medium: Internet ISSN: 1470-8752 (Electronic) Linking ISSN: 03005127 NLM ISO Abbreviation: Biochem Soc Trans Subsets: MEDLINE

Comparative Analysis of Host-Pathogen Protein-Protein Interactions between Human and Various Strains of Mycobacterium Tuberculosis.

Authors: Verma D Mudgal B Tufchi N et al.

Source: Clinical laboratory [Clin Lab] 2025 Nov 01; Vol. 71 (11).

Publication Type: Journal Article; Comparative Study

Journal Info: Publisher: Clinical Laboratory Publications Country of Publication: Germany NLM ID: 9705611 Publication Model: Print Cited Medium: Internet ISSN: 1433-6510 (Print) Linking ISSN: 14336510 NLM ISO Abbreviation: Clin Lab Subsets: MEDLINE

Conserved interfaces mediate multiple protein-protein interactions in a prokaryotic metabolon.

Authors: Bhattacharyya S Ranganathan S Chowdhury S et al.

Source: Molecular systems biology [Mol Syst Biol] 2025 Nov; Vol. 21 (11), pp. 1490-1521. Date of Electronic Publication: 2025 Sep 03.

Publication Type: Journal Article

Journal Info: Publisher: EMBO Press Country of Publication: Germany NLM ID: 101235389 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1744-4292 (Electronic) Linking ISSN: 17444292 NLM ISO Abbreviation: Mol Syst Biol Subsets: MEDLINE

Prediction and Evaluation of Coronavirus and Human Protein-Protein Interactions Integrating Five Different Computational Methods.

Authors: Li B Li X Tang X et al.

Source: Proteins [Proteins] 2025 Sep; Vol. 93 (9), pp. 1553-1570. Date of Electronic Publication: 2025 Apr 15.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-Liss Country of Publication: United States NLM ID: 8700181 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0134 (Electronic) Linking ISSN: 08873585 NLM ISO Abbreviation: Proteins Subsets: MEDLINE

Machine Learning and Deep Learning Frameworks for Human-Virus Protein-Protein Interaction Prediction: Emerging Architectures, Methods, Benchmarks, and Challenges.

Authors: Basu S Adhikary D Ghosh K et al.

Source: International journal of molecular sciences [Int J Mol Sci] 2026 Jul 05; Vol. 27 (13). Date of Electronic Publication: 2026 Jul 05.

Publication Type: Journal Article; Review

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE

Mapping the Interactome of c-Myc/Max Heterodimer by Micro-affinity Purification Coupling Mass Spectrometry.

Authors: Zhu Y Han Y Zhang Y et al.

Source: Journal of proteome research [J Proteome Res] 2026 Jul 03; Vol. 25 (7), pp. 3609-3621. Date of Electronic Publication: 2026 Jun 08.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

ProteinNetworkSight: a user-friendly platform for transforming co-expression patterns into actionable therapeutic insights through interactive network visualization.

Authors: Nahor O Migdal N Gibli A et al.

Source: Nucleic acids research [Nucleic Acids Res] 2026 Jul 11; Vol. 54 (W1), pp. W384-W391.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Mass Spectrometry-Based Proteomics Technologies to Define Endogenous Protein-Protein Interactions and Their Applications to Cancer and Viral Infectious Diseases.

Authors: Yu C Adavikolanu R Kaake RM et al.

Source: Mass spectrometry reviews [Mass Spectrom Rev] 2026 Jul-Aug; Vol. 45 (4), pp. 714-744. Date of Electronic Publication: 2025 Feb 09.

Publication Type: Journal Article; Review

Journal Info: Publisher: Wiley Country of Publication: United States NLM ID: 8219702 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-2787 (Electronic) Linking ISSN: 02777037 NLM ISO Abbreviation: Mass Spectrom Rev Subsets: MEDLINE

Linear-time prediction of proteome-scale microbial protein interactions.

Authors: Cornman A Tranzillo M Zulaybar NG et al.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2026 Jun 23; Vol. 123 (25), pp. e2610619123. Date of Electronic Publication: 2026 Jun 17.

Publication Type: Journal Article

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

[Novel technologies for large-scale analysis of cell surface glycoprotein interactions and their applications].

Authors: Liu Y Wu C Zhao Q et al.

Source: Se pu = Chinese journal of chromatography [Se Pu] 2026 May 08; Vol. 44 (5), pp. 515-524.

Publication Type: English Abstract; Journal Article

Journal Info: Publisher: Hua xue za zhi she Country of Publication: China NLM ID: 9424804 Publication Model: Print Cited Medium: Internet ISSN: 1872-2059 (Electronic) Linking ISSN: 10008713 NLM ISO Abbreviation: Se Pu Subsets: MEDLINE

A dynamic gateway: Uncovering the expanded human TOM complex interactome and its regulatory complexity.

Authors: Borrero-Landazabal MA Linke V Kadavá T et al.

Source: Science advances [Sci Adv] 2026 May; Vol. 12 (18), pp. eaeb2995. Date of Electronic Publication: 2026 May 01.

Publication Type: Journal Article

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 101653440 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2375-2548 (Electronic) Linking ISSN: 23752548 NLM ISO Abbreviation: Sci Adv Subsets: MEDLINE

Predicting protein-protein interactions in the human proteome.

Authors: Zhang J Humphreys IR Pei J et al.

Source: Science (New York, N.Y.) [Science] 2025 Oct 23; Vol. 390 (6771), pp. eadt1630. Date of Electronic Publication: 2025 Oct 23.

Publication Type: Journal Article

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE

Topology-aware functional similarity: integrating extended neighborhoods via exponential attenuation.

Authors: Wang P; Department of Computer Science, School of Artificial Intelligence, Chongqing Technology and Business University, No.19, Xuefu Ave, Nanan District, Chongqing, 400067, People's Republic of China. pengw@ctbu.edu.cn.

Source: BMC bioinformatics [BMC Bioinformatics] 2025 Oct 21; Vol. 26 (1), pp. 255. Date of Electronic Publication: 2025 Oct 21.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

PPI-ID: Streamlining protein-protein interaction prediction through domain and SLiM mapping.

Authors: Goodwin HV Atkinson NS

Source: PLoS computational biology [PLoS Comput Biol] 2025 Oct 16; Vol. 21 (10), pp. e1013062. Date of Electronic Publication: 2025 Oct 16 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE