Search Results - "Isbister JB"

Quantitative anatomy and biophysical modeling of ascending neuromodulatory systems in the developing rat neocortex.

Authors: Colangelo, Cristina Muñoz, Alberto Antonietti, Alberto et al.

Source: PLoS Computational Biology. 6/26/2026, Vol. 22 Issue 6, p1-33. 33p.

A multimodal spatial atlas of transcriptomic, morphological, and electrophysiological cell type densities in the mouse brain.

Authors: Verasztó, Csaba Roussel, Yann Kanari, Lida et al.

Source: PLoS Computational Biology. 3/24/2026, Vol. 22 Issue 3, p1-29. 29p.

A multiscale electro-metabolic model of a rat neocortical circuit reveals the impact of ageing on central cortical layers.

Authors: Farina S Cattabiani A Mandge D et al.

Source: PLoS computational biology [PLoS Comput Biol] 2025 May 20; Vol. 21 (5), pp. e1013070. Date of Electronic Publication: 2025 May 20 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Computational modeling reveals biological mechanisms underlying the whisker flick EEG.

Authors: Tharayil J Isbister JB Neufeld E et al.

Source: IScience [iScience] 2025 Oct 17; Vol. 28 (11), pp. 113793. Date of Electronic Publication: 2025 Oct 17 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101724038 Publication Model: eCollection Cited Medium: Internet ISSN: 2589-0042 (Electronic) Linking ISSN: 25890042 NLM ISO Abbreviation: iScience Subsets: PubMed not MEDLINE

Efficient and reliable spike sorting from neural recordings with UMAP-based unsupervised nonlinear dimensionality reduction.

Authors: Suárez-Barrera, Daniel Bayones, Lucas Encinas-Rodríguez, Norberto et al.

Source: PLoS Biology. 11/24/2025, Vol. 23 Issue 11, p1-28. 28p.

BlueRecording: A pipeline for the efficient calculation of extracellular recordings in large-scale neural circuit models.

Authors: Tharayil, Joseph James Blanco Alonso, Jorge Farcito, Silvia et al.

Source: PLoS Computational Biology. 5/23/2025, Vol. 21 Issue 5, p1-25. 25p.

Cortical cell assemblies and their underlying connectivity: An in silico study.

Authors: Ecker A Egas Santander D Bolaños-Puchet S et al.

Source: PLoS computational biology [PLoS Comput Biol] 2024 Mar 11; Vol. 20 (3), pp. e1011891. Date of Electronic Publication: 2024 Mar 11 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

A connectome manipulation framework for the systematic and reproducible study of structure-function relationships through simulations.

Authors: Pokorny C Awile O Isbister JB et al.

Source: Network neuroscience (Cambridge, Mass.) [Netw Neurosci] 2025 Mar 05; Vol. 9 (1), pp. 207-236. Date of Electronic Publication: 2025 Mar 05 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: MIT Press Country of Publication: United States NLM ID: 101719149 Publication Model: eCollection Cited Medium: Internet ISSN: 2472-1751 (Electronic) Linking ISSN: 24721751 NLM ISO Abbreviation: Netw Neurosci Subsets: PubMed not MEDLINE

Neural coding of space by time.

Authors: Löffler, Hubert Gupta, Daya Shankar Bahmer, Andreas

Source: Biological Cybernetics; Aug2024, Vol. 118 Issue 3/4, p215-227, 13p

The Cerebellar Connectome.

Authors: Schmitt O Morawska P Prathapan V et al.

Source: Cerebellum (London, England) [Cerebellum] 2026 Jul 16; Vol. 25 (4). Date of Electronic Publication: 2026 Jul 16.

Publication Type: Journal Article

Journal Info: Publisher: Springer Country of Publication: United States NLM ID: 101089443 Publication Model: Electronic Cited Medium: Internet ISSN: 1473-4230 (Electronic) Linking ISSN: 14734222 NLM ISO Abbreviation: Cerebellum Subsets: MEDLINE

Community-based reconstruction and simulation of a full-scale model of the rat hippocampus CA1 region.

Authors: Romani, Armando Antonietti, Alberto Bella, Davide et al.

Source: PLoS Biology. 11/5/2024, Vol. 22 Issue 11, p1-61. 61p.

On the validity of electric brain signal predictions based on population firing rates.

Authors: Ness, Torbjørn V. Tetzlaff, Tom Einevoll, Gaute T. et al.

Source: PLoS Computational Biology. 4/14/2025, Vol. 21 Issue 4, p1-29. 29p.

The wave-coded brain: transforming spike patterns through space-time dynamics.

Authors: Löffler H Bahmer A

Source: Biological cybernetics [Biol Cybern] 2026 Mar 16; Vol. 120 (2). Date of Electronic Publication: 2026 Mar 16.

Publication Type: Journal Article

Journal Info: Publisher: Springer Verlag Country of Publication: Germany NLM ID: 7502533 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-0770 (Electronic) Linking ISSN: 03401200 NLM ISO Abbreviation: Biol Cybern Subsets: MEDLINE

Modeling and simulation of neocortical micro- and mesocircuitry (Part II, Physiology and experimentation).

Authors: Isbister JB Ecker A Pokorny C et al.

Source: ELife [Elife] 2026 Jan 20; Vol. 13. Date of Electronic Publication: 2026 Jan 20.

Publication Type: Journal Article

Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

Modeling and simulation of neocortical micro- and mesocircuitry (Part I, anatomy).

Authors: Reimann MW Bolaños-Puchet S Courcol JD et al.

Source: ELife [Elife] 2026 Jan 20; Vol. 13. Date of Electronic Publication: 2026 Jan 20.

Publication Type: Journal Article

Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

Self-organising coordinate transformation with peaked and monotonic gain modulation in the primate dorsal visual pathway.

Authors: Navarro, Daniel M. Mender, Bedeho M. W. Smithson, Hannah E. et al.

Source: PLoS ONE. 11/29/2018, Vol. 13 Issue 11, p1-50. 50p.

Assemblies, synapse clustering, and network topology interact with plasticity to explain structure-function relationships of the cortical connectome.

Authors: Ecker A Egas Santander D Abdellah M et al.

Source: ELife [Elife] 2025 Jul 03; Vol. 13. Date of Electronic Publication: 2025 Jul 03.

Publication Type: Journal Article

Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

A speed-accurate self-sustaining head direction cell path integration model without recurrent excitation.

Authors: Page, Hector J. I. Walters, Daniel Stringer, Simon M.

Source: Network: Computation in Neural Systems; 2018, Vol. 29 Issue 1-4, p37-69, 33p

Extracellular Spike Waveforms: Morphology, Biophysics, and Classification Strategies.

Authors: Sun SH Ibbotson MR

Source: The Journal of neuroscience : the official journal of the Society for Neuroscience [J Neurosci] 2026 Apr 08; Vol. 46 (14). Date of Electronic Publication: 2026 Apr 08.

Publication Type: Journal Article; Review

Journal Info: Publisher: Society for Neuroscience Country of Publication: United States NLM ID: 8102140 Publication Model: Electronic Cited Medium: Internet ISSN: 1529-2401 (Electronic) Linking ISSN: 02706474 NLM ISO Abbreviation: J Neurosci Subsets: MEDLINE

Pathology expert witness testimony and pathology practice: a tale of 2 standards.

Authors: Foucar E Mohr JC Palmisano DJ

Source: Archives of Pathology & Laboratory Medicine. Oct2005, Vol. 129 Issue 10, p1268-1276. 9p.

URL: 18633245