Search Results - "Mathis SV"

Analysis of the confinement string in (2+1)-dimensional Quantum Electrodynamics with a trapped-ion quantum computer.

Authors: Crippa, Arianna Jansen, Karl Rinaldi, Enrico

Source: Communications Physics. 1/30/2026, Vol. 9 Issue 1, p1-12. 12p.

RNAtranslator: Modeling protein-conditional RNA design as sequence-to-sequence natural language translation.

Authors: Shukueian Tabrizi, Sobhan Barazandeh, Sina Hashemi Aghdam, Helyasadat et al.

Source: PLoS Computational Biology. 10/3/2025, Vol. 21 Issue 10, p1-27. 27p.

Towards determining the (2+1)-dimensional quantum electrodynamics running coupling with Monte Carlo and quantum computing methods.

Authors: Crippa, Arianna Romiti, Simone Funcke, Lena et al.

Source: Communications Physics. 9/11/2025, Vol. 8 Issue 1, p1-12. 12p.

Deep generative models for 3D structure-based drug design and molecular optimisation: a comprehensive survey.

Authors: Zhang Y Fu Y Wang G

Source: Journal of computer-aided molecular design [J Comput Aided Mol Des] 2026 Jul 16; Vol. 40 (1). Date of Electronic Publication: 2026 Jul 16.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer Country of Publication: Netherlands NLM ID: 8710425 Publication Model: Electronic Cited Medium: Internet ISSN: 1573-4951 (Electronic) Linking ISSN: 0920654X NLM ISO Abbreviation: J Comput Aided Mol Des Subsets: MEDLINE

Tensor networks for lattice gauge theories beyond one dimension.

Authors: Magnifico, Giuseppe Cataldi, Giovanni Rigobello, Marco et al.

Source: Communications Physics. 8/9/2025, Vol. 8 Issue 1, p1-16. 16p.

PairReg: A method for enhancing the learning of molecular structure representation in equivariant graph neural networks.

Authors: Ren, Zhen Liu, Yu Zhang, Sen

Source: PLoS ONE. 7/31/2025, Vol. 20 Issue 7, p1-9. 9p.

Bridging chemical space and biological efficacy: advances and challenges in applying generative models in structural modification of natural products.

Authors: Liu, Chuan-Su Yan, Bing-Chao Sun, Han-Dong et al.

Source: Natural Products & Bioprospecting. 6/6/2025, Vol. 15 Issue 1, p1-17. 17p.

Standardization guidelines and future trends for PET hydrolase research.

Authors: Wei R Westh P Weber G et al.

Source: Nature communications [Nat Commun] 2025 May 20; Vol. 16 (1), pp. 4684. Date of Electronic Publication: 2025 May 20.

Publication Type: Journal Article; Review

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Artificial intelligence-driven computational methods for antibody design and optimization.

Authors: Vecchietti LF Wijaya BN Armanuly A et al.

Source: MAbs [MAbs] 2025 Dec; Vol. 17 (1), pp. 2528902. Date of Electronic Publication: 2025 Jul 18.

Publication Type: Journal Article; Review; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101479829 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1942-0870 (Electronic) Linking ISSN: 19420862 NLM ISO Abbreviation: MAbs Subsets: MEDLINE

FlowDock: Geometric flow matching for generative protein-ligand docking and affinity prediction.

Authors: Morehead A Cheng J

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2025 Jul 01; Vol. 41 (Supplement_1), pp. i198-i206.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Protein structure accuracy estimation using geometry-complete perceptron networks.

Authors: Morehead A Liu J Cheng J

Source: Protein science : a publication of the Protein Society [Protein Sci] 2024 Mar; Vol. 33 (3), pp. e4932.

Publication Type: Journal Article

Journal Info: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print Cited Medium: Internet ISSN: 1469-896X (Electronic) Linking ISSN: 09618368 NLM ISO Abbreviation: Protein Sci Subsets: MEDLINE