Search Results - "Parallel algorithms"

The Parallel Epsilon Algorithm for Triobjective Integer Optimization Problems.

Authors: Prinz, Kathrin Ruzika, Stefan

Source: INFORMS Journal on Computing. Sep/Oct2026, Vol. 38 Issue 5, p1651-1672. 22p.

PanDelos-plus: A parallel algorithm for computing sequence homology in pangenomic analysis.

Authors: Colli S Maresi E Bonnici V

Source: PLoS computational biology [PLoS Comput Biol] 2026 Sep 17; Vol. 22 (9), pp. e1014724. Date of Electronic Publication: 2026 Sep 17 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Toward Real-Time GPU Implementation of Diverging Beam With Synthetic Aperture Technique With Non-linear Beamforming for a Curvilinear Array.

Authors: Basavarajappa L R R Tushar R et al.

Source: Ultrasonic imaging [Ultrason Imaging] 2026 Sep; Vol. 48 (5), pp. 311-321. Date of Electronic Publication: 2025 Dec 29.

Publication Type: Journal Article

Journal Info: Publisher: Sage Country of Publication: England NLM ID: 7909167 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-0910 (Electronic) Linking ISSN: 01617346 NLM ISO Abbreviation: Ultrason Imaging Subsets: MEDLINE

Fast Association Recovery in High Dimensions by Parallel Learning.

Authors: Dong, Ruipeng Wen, Canhong

Source: INFORMS Journal on Computing. May/Jun2026, Vol. 38 Issue 3, p982-997. 16p.

Ultra-fast genetic colocalisation across millions of association signals.

Authors: Jesse M Riet AE Alasoo K

Source: PLoS genetics [PLoS Genet] 2026 Jun 17; Vol. 22 (6), pp. e1012209. Date of Electronic Publication: 2026 Jun 17 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7404 (Electronic) Linking ISSN: 15537390 NLM ISO Abbreviation: PLoS Genet Subsets: MEDLINE

ReadChop: a high-performance demultiplexer for long-read sequencing data.

Authors: Jiang C Xiong Y

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2026 Jun 01; Vol. 42 (6).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Efficiency of Parallel and Restart Exploration Strategies in Model-Free Stochastic Simulations.

Authors: Garcia, Ernesto Bermolen, Paola Jonckheere, Matthieu et al.

Source: Stochastic Systems (INFORMS). Sep2026, Vol. 16 Issue 3, p264-288. 25p.

Randomized partially-symmetric ADMM-based algorithm and its momentum-accelerated variant for traffic assignment problem.

Authors: Liu, Pengjie Shao, Feng Shao, Hu et al.

Source: Transportation. Oct2026, Vol. 53 Issue 6, p4021-4052. 32p.

Subjects: Traffic assignment, Parallel algorithms, Jacobi method, Gauss-Seidel method, Parallel programming, Momentum (Mechanics)

A Mathematical Model and Parallel Algorithms for Large-Scale Extensible Traffic Network Optimization.

Authors: Lau, Nguyen Dinh Chien, Tran Quoc Thanh, Le Manh

Source: IAENG International Journal of Computer Science. Sep2026, Vol. 53 Issue 9, p3729-3741. 13p.

Subjects: Mathematical models, Parallel algorithms, Traffic flow, Traffic congestion, Optimization algorithms, Urban transportation

Geographic Terms: Da Nang (Vietnam)

BINSEQ: A family of high-performance binary formats for nucleotide sequences.

Authors: Teyssier N Dobin A

Source: PLoS computational biology [PLoS Comput Biol] 2026 May 28; Vol. 22 (5), pp. e1014181. Date of Electronic Publication: 2026 May 28 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Cache-efficient and vectorized parallel dynamic programming for RNA folding.

Authors: Gruzewski M Palkowski M

Source: PloS one [PLoS One] 2026 May 20; Vol. 21 (5), pp. e0349146. Date of Electronic Publication: 2026 May 20 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Umi-pipeline-nf: a modular and scalable workflow for UMI-tagged nanopore amplicon analysis with real-time sequencing integration and GPU-acceleration.

Authors: Amstler S Forer L Escherich L et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2026 Apr 07; Vol. 42 (4).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

PH-SHOWOA: Parallel hybrid SHO-WOA for VRPSPDTW.

Authors: Nguyen T Vaclav S Vo B et al.

Source: PloS one [PLoS One] 2026 Mar 27; Vol. 21 (3), pp. e0343262. Date of Electronic Publication: 2026 Mar 27 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Loop parallelization in source code for internet of things computing using hybrid heuristic algorithm.

Authors: Arasteh B Sefati SS Kusetogullari H et al.

Source: PloS one [PLoS One] 2026 Mar 27; Vol. 21 (3), pp. e0341059. Date of Electronic Publication: 2026 Mar 27 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Accelerating mesh-based Monte Carlo simulations using contemporary graphics ray-tracing hardware.

Authors: Yan S Dwyer D Kaeli DR et al.

Source: Journal of biomedical optics [J Biomed Opt] 2026 Mar; Vol. 31 (3), pp. 035002. Date of Electronic Publication: 2026 Mar 18.

Publication Type: Journal Article

Journal Info: Publisher: Published by SPIE--the International Society for Optical Engineering in cooperation with International Biomedical Optics Society Country of Publication: United States NLM ID: 9605853 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1560-2281 (Electronic) Linking ISSN: 10833668 NLM ISO Abbreviation: J Biomed Opt Subsets: MEDLINE

Cloud-Based Distributed Deep Learning for Credit Card Fraud Detection: A Scalability and Data Partitioning Analysis.

Authors: Izaddoost, Alireza Celly, Bhrigu Chatterjee, Amlan

Source: Applied Sciences (2076-3417); Sep2026, Vol. 16 Issue 18, p9157, 36p

Comparison of Parallelization Techniques for Boolean Reasoning-Based Binary Biclustering.

Authors: Kania, Jacek Michalak, Marcin Chwełatiuk, Konrad et al.

Source: Symmetry (20738994). Sep2026, Vol. 18 Issue 9, p1447. 14p.

Accelerating minimap2 for whole-genome alignment.

Authors: Chandra G Vasimuddin M Misra S et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2026 Feb 28; Vol. 42 (3).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Performance evaluation of GPU-based parallel sorting algorithms.

Authors: Ala'anzy MA Tolendi N Baubek B et al.

Source: PloS one [PLoS One] 2026 Feb 03; Vol. 21 (2), pp. e0342167. Date of Electronic Publication: 2026 Feb 03 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Bit-reproducible parallel phylogenetic tree inference.

Authors: Stelz C Hübner L Stamatakis A

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2026 Feb 03; Vol. 42 (2).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE