Search Results - "Pfrender ME"

The mutation landscape of Daphnia obtusa reveals evolutionary forces shaping genome stability.

Authors: Deng R Guo F Fan F et al.

Source: Molecular biology and evolution [Mol Biol Evol] 2026 Feb 02; Vol. 43 (2).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 8501455 Publication Model: Print Cited Medium: Internet ISSN: 1537-1719 (Electronic) Linking ISSN: 07374038 NLM ISO Abbreviation: Mol Biol Evol Subsets: MEDLINE

Detection of CRISPR-Cas-induced mutations in Daphnia.

Authors: Neupane S Pfrender ME Wang L et al.

Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2026 May 06; Vol. 16 (5).

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN: 2160-1836 (Electronic) Linking ISSN: 21601836 NLM ISO Abbreviation: G3 (Bethesda) Subsets: MEDLINE

Isolated dwarfism and sexual dimorphism in a mainland population of the greater short-horned lizard (Phrynosoma hernandesi) and the Great Plains toad (Anaxyrus cognatus).

Authors: Lahti ME Latta Iv LC Pfrender ME et al.

Source: PloS one [PLoS One] 2025 Dec 26; Vol. 20 (12), pp. e0339275. Date of Electronic Publication: 2025 Dec 26 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Detection of CRISPR-Cas-induced mutations in Daphnia.

Authors: Neupane S Pfrender ME Wang L et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Dec 08. Date of Electronic Publication: 2025 Dec 08.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Rapid evolution of mitochondrion-related genes in haplodiploid arthropods.

Authors: Li Y Thomas GWC Richards S et al.

Source: BMC biology [BMC Biol] 2024 Oct 10; Vol. 22 (1), pp. 229. Date of Electronic Publication: 2024 Oct 10.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007 (Electronic) Linking ISSN: 17417007 NLM ISO Abbreviation: BMC Biol Subsets: MEDLINE

Evaluating cell type deconvolution in FFPE breast tissue: application to benign breast disease.

Authors: Liu Y Vierkant RA Bhagwate A et al.

Source: NAR genomics and bioinformatics [NAR Genom Bioinform] 2024 Aug 06; Vol. 6 (3), pp. lqae098. Date of Electronic Publication: 2024 Aug 06 (Print Publication: 2024).

Publication Type: Journal Article; Review

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: MEDLINE

The mutation landscape of Daphnia obtusa reveals evolutionary forces shaping genome stability.

Authors: Deng R Guo F Wei W et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Sep 19. Date of Electronic Publication: 2025 Sep 19.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

QTL identification and characterization of the recombination landscape of the mountain pine beetle (Dendroctonus ponderosae).

Authors: Pushman C Ragland GJ Pfrender ME et al.

Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2025 Jul 09; Vol. 15 (7).

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN: 2160-1836 (Electronic) Linking ISSN: 21601836 NLM ISO Abbreviation: G3 (Bethesda) Subsets: MEDLINE

Evolutionary Insights from a Large-Scale Survey of Population-Genomic Variation.

Authors: Ye Z Wei W Pfrender ME et al.

Source: Molecular biology and evolution [Mol Biol Evol] 2023 Nov 03; Vol. 40 (11).

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 8501455 Publication Model: Print Cited Medium: Internet ISSN: 1537-1719 (Electronic) Linking ISSN: 07374038 NLM ISO Abbreviation: Mol Biol Evol Subsets: MEDLINE

Evolutionary Genomics of Sister Species Differing in Effective Population Sizes and Recombination Rates.

Authors: Ye Z Pfrender ME Lynch M

Source: Genome biology and evolution [Genome Biol Evol] 2023 Nov 01; Vol. 15 (11).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

Quality control recommendations for RNASeq using FFPE samples based on pre-sequencing lab metrics and post-sequencing bioinformatics metrics.

Authors: Liu Y Bhagwate A Winham SJ et al.

Source: BMC medical genomics [BMC Med Genomics] 2022 Sep 16; Vol. 15 (1), pp. 195. Date of Electronic Publication: 2022 Sep 16.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101319628 Publication Model: Electronic Cited Medium: Internet ISSN: 1755-8794 (Electronic) Linking ISSN: 17558794 NLM ISO Abbreviation: BMC Med Genomics Subsets: MEDLINE

SARS-CoV-2 Variant Tracking and Mitigation During In-Person Learning at a Midwestern University in the 2020-2021 School Year.

Authors: Avendano C Lilienfeld A Rulli L et al.

Source: JAMA network open [JAMA Netw Open] 2022 Feb 01; Vol. 5 (2), pp. e2146805. Date of Electronic Publication: 2022 Feb 01.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Medical Association Country of Publication: United States NLM ID: 101729235 Publication Model: Electronic Cited Medium: Internet ISSN: 2574-3805 (Electronic) Linking ISSN: 25743805 NLM ISO Abbreviation: JAMA Netw Open Subsets: MEDLINE

Genome-Wide Allele-Specific Expression in Obligately Asexual Daphnia pulex and the Implications for the Genetic Basis of Asexuality.

Authors: Ye Z Jiang X Pfrender ME et al.

Source: Genome biology and evolution [Genome Biol Evol] 2021 Nov 05; Vol. 13 (11).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

Combining natural language processing and metabarcoding to reveal pathogen-environment associations.

Authors: Molik DC Tomlinson D Davitt S et al.

Source: PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2021 Apr 07; Vol. 15 (4), pp. e0008755. Date of Electronic Publication: 2021 Apr 07 (Print Publication: 2021).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101291488 Publication Model: eCollection Cited Medium: Internet ISSN: 1935-2735 (Electronic) Linking ISSN: 19352727 NLM ISO Abbreviation: PLoS Negl Trop Dis Subsets: MEDLINE

Environment and shipping drive environmental DNA beta-diversity among commercial ports.

Authors: Andrés J Czechowski P Grey E et al.

Source: Molecular ecology [Mol Ecol] 2023 Dec; Vol. 32 (23), pp. 6696-6709. Date of Electronic Publication: 2023 Mar 28.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9214478 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-294X (Electronic) Linking ISSN: 09621083 NLM ISO Abbreviation: Mol Ecol Subsets: MEDLINE

The roles of vicariance and isolation by distance in shaping biotic diversification across an ancient archipelago: evidence from a Seychelles caecilian amphibian.

Authors: Maddock ST Nussbaum RA Day JJ et al.

Source: BMC evolutionary biology [BMC Evol Biol] 2020 Aug 26; Vol. 20 (1), pp. 110. Date of Electronic Publication: 2020 Aug 26.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100966975 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2148 (Electronic) Linking ISSN: 14712148 NLM ISO Abbreviation: BMC Evol Biol Subsets: MEDLINE

Gene content evolution in the arthropods.

Authors: Thomas GWC Dohmen E Hughes DST et al.

Source: Genome biology [Genome Biol] 2020 Jan 23; Vol. 21 (1), pp. 15. Date of Electronic Publication: 2020 Jan 23.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex.

Authors: Kvist J Athanàsio CG Pfrender ME et al.

Source: BMC genomics [BMC Genomics] 2020 Jan 06; Vol. 21 (1), pp. 17. Date of Electronic Publication: 2020 Jan 06.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

Symptomatic, Presymptomatic, and Asymptomatic Transmission of SARS-CoV-2 in a University Student Population, August-November 2020.

Authors: Krieg SJ Schnur JJ Miranda ML et al.

Source: Public health reports (Washington, D.C. : 1974) [Public Health Rep] 2022 Sep-Oct; Vol. 137 (5), pp. 1023-1030. Date of Electronic Publication: 2022 Jul 16.

Publication Type: Journal Article

Journal Info: Publisher: SAGE Publications Country of Publication: United States NLM ID: 9716844 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1468-2877 (Electronic) Linking ISSN: 00333549 NLM ISO Abbreviation: Public Health Rep Subsets: MEDLINE

Pattern of DNA Methylation in Daphnia: Evolutionary Perspective.

Authors: Kvist J Gonçalves Athanàsio C Shams Solari O et al.

Source: Genome biology and evolution [Genome Biol Evol] 2018 Aug 01; Vol. 10 (8), pp. 1988-2007. Date of Electronic Publication: 2018 Aug 01.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Electronic Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE