Search Results - "Pinhassi J"

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Effects of Bacteriophages on the Population Dynamics of Four Strains of Pelagic Marine Bacteria.

Authors: Middelboe, M. Hagström, A. Blackburn, N. et al.

Source: Microbial Ecology. Oct2001, Vol. 42 Issue 3, p395-406. 12p. 2 Black and White Photographs, 1 Diagram, 3 Charts, 7 Graphs.

nf-core/magmap: Map metatranscriptomes to large collections of genomes.

Authors: Di Leo D Nilsson E Westmeijer G et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2026 Jul 02; Vol. 42 (7).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Decoding the genetic drivers of marine bacterial blooms through comparative genomics.

Authors: Rey-Velasco X Auladell A Deulofeu-Capo O et al.

Source: Microbiome [Microbiome] 2025 Oct 01; Vol. 13 (1), pp. 198. Date of Electronic Publication: 2025 Oct 01.

Publication Type: Journal Article; Video-Audio Media; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618 (Electronic) Linking ISSN: 20492618 NLM ISO Abbreviation: Microbiome Subsets: MEDLINE

Dealing with phosphorus deficiency: contrasting strategies in marine phytoplankton and bacteria.

Authors: Delgadillo-Nuño E Teira E Fernández E et al.

Source: ISME communications [ISME Commun] 2026 Feb 20; Vol. 6 (1), pp. ycag035. Date of Electronic Publication: 2026 Feb 20 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918205372406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2730-6151 (Electronic) Linking ISSN: 27306151 NLM ISO Abbreviation: ISME Commun Subsets: PubMed not MEDLINE

The Nextflow nf-core/metatdenovo pipeline for reproducible annotation of metatranscriptomes, and more.

Authors: Di Leo D Nilsson E Krinos A et al.

Source: PeerJ [PeerJ] 2025 Dec 05; Vol. 13, pp. e20328. Date of Electronic Publication: 2025 Dec 05 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: PeerJ Inc Country of Publication: United States NLM ID: 101603425 Publication Model: eCollection Cited Medium: Internet ISSN: 2167-8359 (Electronic) Linking ISSN: 21678359 NLM ISO Abbreviation: PeerJ Subsets: MEDLINE

Pronounced seasonal dynamics in transcription of vitamin B1 acquisition strategies diverge among Baltic Sea bacterioplankton.

Authors: Pérez-Martínez C Pontiller B Martínez-García S et al.

Source: Environmental microbiome [Environ Microbiome] 2025 Sep 16; Vol. 20 (1), pp. 115. Date of Electronic Publication: 2025 Sep 16.

Publication Type: Journal Article

Journal Info: Publisher: BMC Country of Publication: England NLM ID: 101768168 Publication Model: Electronic Cited Medium: Internet ISSN: 2524-6372 (Electronic) Linking ISSN: 25246372 NLM ISO Abbreviation: Environ Microbiome Subsets: PubMed not MEDLINE

Experimental assessment of interactions between marine bacteria and model protists: from predator-prey relationships to bacterial-mediated lysis.

Authors: Axelsson-Olsson D Gubonin N Israelsson S et al.

Source: Applied and environmental microbiology [Appl Environ Microbiol] 2025 Jun 18; Vol. 91 (6), pp. e0092925. Date of Electronic Publication: 2025 May 30.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7605801 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5336 (Electronic) Linking ISSN: 00992240 NLM ISO Abbreviation: Appl Environ Microbiol Subsets: MEDLINE

Seasonal dynamics and nutrient controls of biogenic silica in Baltic Sea surface microplankton and picoplankton communities.

Authors: Churakova Y Aguilera A Charalampous E et al.

Source: Applied and environmental microbiology [Appl Environ Microbiol] 2025 May 21; Vol. 91 (5), pp. e0067625. Date of Electronic Publication: 2025 Apr 28.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7605801 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5336 (Electronic) Linking ISSN: 00992240 NLM ISO Abbreviation: Appl Environ Microbiol Subsets: MEDLINE

The evaluation of biogenic silica in brackish and freshwater strains reveals links between phylogeny and silica accumulation in picocyanobacteria.

Authors: Aguilera A Lundin D Charalampous E et al.

Source: Applied and environmental microbiology [Appl Environ Microbiol] 2025 Apr 23; Vol. 91 (4), pp. e0252724. Date of Electronic Publication: 2025 Mar 27.

Publication Type: Journal Article

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7605801 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5336 (Electronic) Linking ISSN: 00992240 NLM ISO Abbreviation: Appl Environ Microbiol Subsets: MEDLINE

Unveiling interactions mediated by B vitamins between diatoms and their associated bacteria from cocultures.

Authors: Costas-Selas C Martínez-García S Pinhassi J et al.

Source: Journal of phycology [J Phycol] 2024 Dec; Vol. 60 (6), pp. 1456-1470. Date of Electronic Publication: 2024 Oct 16.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley Periodicals Inc Country of Publication: United States NLM ID: 9882935 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1529-8817 (Electronic) Linking ISSN: 00223646 NLM ISO Abbreviation: J Phycol Subsets: MEDLINE

Divergent gene expression responses in two Baltic Sea heterotrophic model bacteria to dinoflagellate dissolved organic matter.

Authors: Osbeck CMG Lundin D Karlsson C et al.

Source: PloS one [PLoS One] 2022 Nov 17; Vol. 17 (11), pp. e0243406. Date of Electronic Publication: 2022 Nov 17 (Print Publication: 2022).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Prokaryotic morphological features and maintenance activities governed by seasonal productivity conditions.

Authors: Verma A Amnebrink D Lee CC et al.

Source: FEMS microbiology ecology [FEMS Microbiol Ecol] 2024 Oct 25; Vol. 100 (11).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 8901229 Publication Model: Print Cited Medium: Internet ISSN: 1574-6941 (Electronic) Linking ISSN: 01686496 NLM ISO Abbreviation: FEMS Microbiol Ecol Subsets: MEDLINE

Ploidy levels in diverse picocyanobacteria from the Baltic Sea.

Authors: Weissenbach J Aguilera A Bas Conn L et al.

Source: Environmental microbiology reports [Environ Microbiol Rep] 2024 Oct; Vol. 16 (5), pp. e70005.

Publication Type: Journal Article

Journal Info: Publisher: Society for Applied Microbiology and Blackwell Pub Country of Publication: United States NLM ID: 101499207 Publication Model: Print Cited Medium: Internet ISSN: 1758-2229 (Electronic) Linking ISSN: 17582229 NLM ISO Abbreviation: Environ Microbiol Rep Subsets: MEDLINE

Ecological filtering drives rapid spatiotemporal dynamics in fish skin microbiomes.

Authors: Berggren H Yıldırım Y Nordahl O et al.

Source: Molecular ecology [Mol Ecol] 2024 Sep; Vol. 33 (18), pp. e17496. Date of Electronic Publication: 2024 Aug 19.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9214478 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-294X (Electronic) Linking ISSN: 09621083 NLM ISO Abbreviation: Mol Ecol Subsets: MEDLINE

Single cell genomics reveals plastid-lacking Picozoa are close relatives of red algae.

Authors: Schön ME Zlatogursky VV Singh RP et al.

Source: Nature communications [Nat Commun] 2021 Nov 17; Vol. 12 (1), pp. 6651. Date of Electronic Publication: 2021 Nov 17.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Ecophysiological analysis reveals distinct environmental preferences in closely related Baltic Sea picocyanobacteria.

Authors: Aguilera A Alegria Zufia J Bas Conn L et al.

Source: Environmental microbiology [Environ Microbiol] 2023 Sep; Vol. 25 (9), pp. 1674-1695. Date of Electronic Publication: 2023 Apr 17.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Blackwell Science Country of Publication: England NLM ID: 100883692 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1462-2920 (Electronic) Linking ISSN: 14622912 NLM ISO Abbreviation: Environ Microbiol Subsets: MEDLINE

Direct effects of organic pollutants on the growth and gene expression of the Baltic Sea model bacterium Rheinheimera sp. BAL341.

Authors: Karlsson CMG Cerro-Gálvez E Lundin D et al.

Source: Microbial biotechnology [Microb Biotechnol] 2019 Sep; Vol. 12 (5), pp. 892-906. Date of Electronic Publication: 2019 Jul 04.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-Blackwell Country of Publication: United States NLM ID: 101316335 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1751-7915 (Electronic) Linking ISSN: 17517915 NLM ISO Abbreviation: Microb Biotechnol Subsets: MEDLINE