Search Results - "Piomponi V"

Disentangling coevolutionary constraints for modeling protein conformational heterogeneity.

Authors: Li, Shimian Zhang, Chengwei Kong, Lupeng et al.

Source: Communications Chemistry. 2/26/2026, Vol. 9 Issue 1, p1-15. 15p.

Elucidating the Structure and Activation Mechanisms of GPCRs Using Modern Computational and AI Tools.

Authors: Uba AI; Department of Molecular Biology and Genetics, Istanbul AREL University, Istanbul, 34537, Türkiye. abdullahi.iu3@gmail.com.

Source: Cell biochemistry and biophysics [Cell Biochem Biophys] 2026 Jun; Vol. 84 (2), pp. 1629-1646. Date of Electronic Publication: 2025 Dec 18.

Publication Type: Journal Article; Review

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9701934 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1559-0283 (Electronic) Linking ISSN: 10859195 NLM ISO Abbreviation: Cell Biochem Biophys Subsets: MEDLINE

Umbrella Refinement of Ensembles—An Alternative View of Ensemble Optimization.

Authors: Stöckelmaier, Johannes Capraz, Tümay Oostenbrink, Chris

Source: Molecules. Jun2025, Vol. 30 Issue 11, p2449. 21p.

Molecular Simulations Matching Denaturation Experiments for N⁶-Methyladenosine.

Authors: Piomponi V Fröhlking T Bernetti M et al.

Source: ACS central science [ACS Cent Sci] 2022 Aug 24; Vol. 8 (8), pp. 1218-1228. Date of Electronic Publication: 2022 Aug 03.

Publication Type: Journal Article

Journal Info: Publisher: ACS Publications Country of Publication: United States NLM ID: 101660035 Publication Model: Print-Electronic Cited Medium: Print ISSN: 2374-7943 (Print) Linking ISSN: 23747943 NLM ISO Abbreviation: ACS Cent Sci Subsets: PubMed not MEDLINE

Computational studies on the catalytic potential of the double active site for enzyme engineering.

Authors: Krishna, Naveen Banchallihundi Roopa, Lalitha Pravin Kumar, R. et al.

Source: Scientific Reports. 8/2/2024, Vol. 14 Issue 1, p1-15. 15p.

A Hybrid Monte Carlo study of argon solidification.

Authors: Alizadeh, Vahideh Garofalo, Marco Urbach, Carsten et al.

Source: Zeitschrift für Naturforschung B: A Journal of Chemical Sciences. Apr2024, Vol. 79 Issue 4, p283-291. 9p.

Unique conformational dynamics and protein recognition of A-to-I hyper-edited dsRNA.

Authors: Müller-Hermes C Piomponi V Hilber S et al.

Source: Nucleic acids research [Nucleic Acids Res] 2025 Jun 20; Vol. 53 (12).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

U2 snRNP recognizes the branch site through a loaded-spring strand-invasion mechanism.

Authors: Pokorná P Pena V Magistrato A

Source: Nucleic acids research [Nucleic Acids Res] 2026 May 05; Vol. 54 (9).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Zα and Zβ domains of ADAR1 and ZBP1 bind G-quadruplexes with nanomolar affinities, establishing Zβ as a G-quadruplex-specific domain.

Authors: Kroft CW Krall JB Warchol M et al.

Source: Nucleic acids research [Nucleic Acids Res] 2026 Apr 23; Vol. 54 (8).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Influence of contact map topology on RNA structure prediction.

Authors: Faber C Upadhyay U Taubert O et al.

Source: Nucleic acids research [Nucleic Acids Res] 2025 Nov 26; Vol. 53 (22).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE