Search Results - "Pust MM"

An infant nasal microbial gene atlas uncovers intervention-driven microbiome shifts and salt-resistant pathogen expansion.

Authors: Steinberg R Pust MM Arias-Rojas A et al.

Corporate Authors: Steinberg R Pust MM Arias-Rojas A et al.

Source: Cell host & microbe [Cell Host Microbe] 2026 May 13; Vol. 34 (5), pp. 925-941.e6. Date of Electronic Publication: 2026 Apr 20.

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101302316 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1934-6069 (Electronic) Linking ISSN: 19313128 NLM ISO Abbreviation: Cell Host Microbe Subsets: MEDLINE

A structure-informed deep learning framework for modeling TCR-peptide-HLA interactions.

Authors: Cao K Li R Stražar M et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 Apr 11. Date of Electronic Publication: 2026 Apr 11.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Wochenende - modular and flexible alignment-based shotgun metagenome analysis.

Authors: Rosenboom I Scheithauer T Friedrich FC et al.

Source: BMC genomics [BMC Genomics] 2022 Nov 11; Vol. 23 (1), pp. 748. Date of Electronic Publication: 2022 Nov 11.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

Commensal consortia decolonize Enterobacteriaceae via ecological control.

Authors: Furuichi M Kawaguchi T Pust MM et al.

Source: Nature [Nature] 2024 Sep; Vol. 633 (8031), pp. 878-886. Date of Electronic Publication: 2024 Sep 18.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

Absence of a pancreatic microbiome in intraductal papillary mucinous neoplasm.

Authors: Pust MM Rocha Castellanos DM Rzasa K et al.

Source: Gut [Gut] 2024 Jun 06; Vol. 73 (7), pp. 1131-1141. Date of Electronic Publication: 2024 Jun 06.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: British Medical Assn Country of Publication: England NLM ID: 2985108R Publication Model: Electronic Cited Medium: Internet ISSN: 1468-3288 (Electronic) Linking ISSN: 00175749 NLM ISO Abbreviation: Gut Subsets: MEDLINE

The human respiratory tract microbial community structures in healthy and cystic fibrosis infants.

Authors: Pust MM Wiehlmann L Davenport C et al.

Source: NPJ biofilms and microbiomes [NPJ Biofilms Microbiomes] 2020 Dec 15; Vol. 6 (1), pp. 61. Date of Electronic Publication: 2020 Dec 15.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: United States NLM ID: 101666944 Publication Model: Electronic Cited Medium: Internet ISSN: 2055-5008 (Electronic) Linking ISSN: 20555008 NLM ISO Abbreviation: NPJ Biofilms Microbiomes Subsets: MEDLINE

Linking microbial genes to plasma and stool metabolites uncovers host-microbial interactions underlying ulcerative colitis disease course.

Authors: Schirmer M Stražar M Avila-Pacheco J et al.

Source: Cell host & microbe [Cell Host Microbe] 2024 Feb 14; Vol. 32 (2), pp. 209-226.e7. Date of Electronic Publication: 2024 Jan 11.

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101302316 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1934-6069 (Electronic) Linking ISSN: 19313128 NLM ISO Abbreviation: Cell Host Microbe Subsets: MEDLINE

Rationally-defined microbial consortia suppress multidrug-resistant proinflammatory Enterobacteriaceae via ecological control.

Authors: Honda K Furuichi M Kawaguchi T et al.

Source: Research square [Res Sq] 2023 Oct 23. Date of Electronic Publication: 2023 Oct 23.

Publication Type: Preprint; Journal Article

Journal Info: Country of Publication: United States NLM ID: 101768035 Publication Model: Electronic Cited Medium: Internet ISSN: 2693-5015 (Electronic) Linking ISSN: 26935015 NLM ISO Abbreviation: Res Sq Subsets: PubMed not MEDLINE

Longitudinal development of the airway metagenome of preterm very low birth weight infants during the first two years of life.

Authors: Rosenboom I Pust MM Pirr S et al.

Source: ISME communications [ISME Commun] 2023 Jul 20; Vol. 3 (1), pp. 75. Date of Electronic Publication: 2023 Jul 20.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918205372406676 Publication Model: Electronic Cited Medium: Internet ISSN: 2730-6151 (Electronic) Linking ISSN: 27306151 NLM ISO Abbreviation: ISME Commun Subsets: PubMed not MEDLINE

The Cystic Fibrosis Upper and Lower Airway Metagenome.

Authors: Pienkowska K Pust MM Gessner M et al.

Source: Microbiology spectrum [Microbiol Spectr] 2023 Apr 13; Vol. 11 (2), pp. e0363322. Date of Electronic Publication: 2023 Mar 09.

Publication Type: Journal Article

Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE; PubMed not MEDLINE

Structural genome variants of Pseudomonas aeruginosa clone C and PA14 strains.

Authors: Klockgether J Pust MM Davenport CF et al.

Source: Frontiers in microbiology [Front Microbiol] 2023 Mar 13; Vol. 14, pp. 1095928. Date of Electronic Publication: 2023 Mar 13 (Print Publication: 2023).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE

Impact of Elexacaftor/Tezacaftor/Ivacaftor Therapy on the Cystic Fibrosis Airway Microbial Metagenome.

Authors: Pallenberg ST Pust MM Rosenboom I et al.

Source: Microbiology spectrum [Microbiol Spectr] 2022 Oct 26; Vol. 10 (5), pp. e0145422. Date of Electronic Publication: 2022 Sep 26.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE

Bacterial tRNA landscape revisited.

Authors: Pust MM Timmis KN Tümmler B

Source: Environmental microbiology [Environ Microbiol] 2022 Jul; Vol. 24 (7), pp. 2890-2894. Date of Electronic Publication: 2022 May 16.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Blackwell Science Country of Publication: England NLM ID: 100883692 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1462-2920 (Electronic) Linking ISSN: 14622912 NLM ISO Abbreviation: Environ Microbiol Subsets: MEDLINE

Direct RNA Nanopore Sequencing of Pseudomonas aeruginosa Clone C Transcriptomes.

Authors: Pust MM Davenport CF Wiehlmann L et al.

Source: Journal of bacteriology [J Bacteriol] 2022 Jan 18; Vol. 204 (1), pp. e0041821. Date of Electronic Publication: 2021 Nov 15.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 2985120R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5530 (Electronic) Linking ISSN: 00219193 NLM ISO Abbreviation: J Bacteriol Subsets: MEDLINE

Bacterial low-abundant taxa are key determinants of a healthy airway metagenome in the early years of human life.

Authors: Pust MM Tümmler B

Source: Computational and structural biotechnology journal [Comput Struct Biotechnol J] 2021 Dec 15; Vol. 20, pp. 175-186. Date of Electronic Publication: 2021 Dec 15 (Print Publication: 2022).

Publication Type: Journal Article

Journal Info: Publisher: Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology Country of Publication: Netherlands NLM ID: 101585369 Publication Model: eCollection Cited Medium: Print ISSN: 2001-0370 (Print) Linking ISSN: 20010370 NLM ISO Abbreviation: Comput Struct Biotechnol J Subsets: PubMed not MEDLINE

Identification of core and rare species in metagenome samples based on shotgun metagenomic sequencing, Fourier transforms and spectral comparisons.

Authors: Pust MM Tümmler B

Source: ISME communications [ISME Commun] 2021 Mar 24; Vol. 1 (1), pp. 2. Date of Electronic Publication: 2021 Mar 24.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918205372406676 Publication Model: Electronic Cited Medium: Internet ISSN: 2730-6151 (Electronic) Linking ISSN: 27306151 NLM ISO Abbreviation: ISME Commun Subsets: PubMed not MEDLINE