Search Results - "Pyke RM"

Distant metastases of melanoma exhibit varying extent of intrapatient proteogenomic heterogeneity.

Authors: Szeitz, Beata Hagemeijer, Yanick Paco Pahi, Zoltan Gabor et al.

Source: Clinical & Translational Medicine. Oct2025, Vol. 15 Issue 10, p1-28. 28p.

Age-Specific Impact of Cribriform Pattern in Prostate Cancer Following Radical Prostatectomy.

Authors: Hilibrand, Ari S Tuac, Yetkin Argun, Okan et al.

Source: Clinical Medicine Insights: Oncology. 8/9/2025, p1-7. 7p.

Genetic variations and recurrence in stage III Korean colorectal cancer: Insights from tumor-only mutation analysis.

Authors: Jeon, Hajin Lee, Jong Lyul Shim, Hyeran et al.

Source: PLoS ONE. 5/23/2025, Vol. 20 Issue 5, p1-21. 21p.

Advanced Minimal Residual Disease Detection Using a Novel Circulating Tumor DNA Assay: A Report of Two Cases.

Authors: Azzi, Georges Slavin, Thomas P. Izaguirre-Carbonell, Jesus et al.

Source: Case Reports in Oncology. 2025, Vol. 18 Issue 1, p1113-1118. 6p.

NeoCircle: pre- and post-operative circulating tumor DNA dynamics predicts survival in neoadjuvant-treated early breast cancer.

Authors: George AM Chen Y Gladchuk S et al.

Source: EMBO molecular medicine [EMBO Mol Med] 2026 Jul; Vol. 18 (7), pp. 2617-2634. Date of Electronic Publication: 2026 May 26.

Publication Type: Journal Article

Journal Info: Publisher: EMBO Press Country of Publication: Germany NLM ID: 101487380 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1757-4684 (Electronic) Linking ISSN: 17574676 NLM ISO Abbreviation: EMBO Mol Med Subsets: MEDLINE

Class II Major Histocompatibility Complex Transactivator (CIITA): A Master MHC-II Regulator Impacting Cancer and Beyond.

Authors: Low, Soon Khai Fujiwara, Yu Nishizaki, Daisuke et al.

Source: Journal of Immunotherapy & Precision Oncology. 2026, Vol. 9 Issue 2, p36-45. 10p.

Impact of sugar-based baits on midgut microbiome composition in Aedes mosquitoes: Implications for vector control.

Authors: Sambanthan, Ranjitha Abu Kassim, Nur Faeza Abuelmaali, Sara A. et al.

Source: PLoS ONE. 3/12/2026, Vol. 21 Issue 3, p1-18. 18p.

Ultrasensitive ctDNA detection for preoperative disease stratification in early-stage lung adenocarcinoma.

Authors: Black JRM Bartha G Abbott CW et al.

Corporate Authors: Black JRM Bartha G Abbott CW et al.

Source: Nature medicine [Nat Med] 2025 Jan; Vol. 31 (1), pp. 70-76. Date of Electronic Publication: 2025 Jan 13.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Company Country of Publication: United States NLM ID: 9502015 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-170X (Electronic) Linking ISSN: 10788956 NLM ISO Abbreviation: Nat Med Subsets: MEDLINE

Genome instability and crosstalk with the immune response.

Authors: Chabanon, Roman M. Danlos, François-Xavier Ouali, Kaissa et al.

Source: Genome Medicine. 11/4/2025, Vol. 17 Issue 1, p1-25. 25p.

A multidimensional analysis of the impact of obesity on immune checkpoint inhibitor therapy efficacy.

Authors: Xu, Wenjing Yang, Yifan Yu, Yue et al.

Source: Cancer Cell International. 10/29/2024, Vol. 24 Issue 1, p1-14. 14p.

Circulating tumor DNA dynamics predict pathological response and guide therapy personalization in the neoadjuvant setting.

Authors: Ahmed HM Al-Hussainy AF Mustafa WW et al.

Source: Discover oncology [Discov Oncol] 2026 Jan 30; Vol. 17 (1). Date of Electronic Publication: 2026 Jan 30.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer Country of Publication: United States NLM ID: 101775142 Publication Model: Electronic Cited Medium: Internet ISSN: 2730-6011 (Electronic) Linking ISSN: 27306011 NLM ISO Abbreviation: Discov Oncol Subsets: PubMed not MEDLINE

The role of neoantigens and tumor mutational burden in cancer immunotherapy: advances, mechanisms, and perspectives.

Authors: Sun, Shengbo Liu, Lanchun Zhang, Jingkang et al.

Source: Journal of Hematology & Oncology. 9/2/2025, Vol. 18 Issue 1, p1-40. 40p.

Withdrawn: Precision Neoantigen Discovery Using Large-scale Immunopeptidomes and Composite Modeling of MHC Peptide Presentation.

Authors: Pyke RM Mellacheruvu D Dea S et al.

Source: Molecular & cellular proteomics : MCP [Mol Cell Proteomics] 2021; Vol. 20, pp. 100111. Date of Electronic Publication: 2021 Jun 12.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Retracted Publication

Journal Info: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 101125647 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-9484 (Electronic) Linking ISSN: 15359476 NLM ISO Abbreviation: Mol Cell Proteomics Subsets: MEDLINE

AI-driven neoantigen identification: a comprehensive review from somatic variant calling to T cell recognition.

Authors: Bakhshian A Ghorghanlu S Atanaki FF et al.

Source: Journal of translational medicine [J Transl Med] 2026 Jul 06; Vol. 24 (1). Date of Electronic Publication: 2026 Jul 06.

Publication Type: Journal Article; Review

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101190741 Publication Model: Electronic Cited Medium: Internet ISSN: 1479-5876 (Electronic) Linking ISSN: 14795876 NLM ISO Abbreviation: J Transl Med Subsets: MEDLINE

HLA class I expression shapes the tumor immune microenvironment and influences prognosis in prostate cancer.

Authors: Likasitwatanakul P Besonen C Tsai AK et al.

Source: Prostate cancer and prostatic diseases [Prostate Cancer Prostatic Dis] 2026 Jun; Vol. 29 (2), pp. 425-434. Date of Electronic Publication: 2025 Oct 25.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 9815755 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-5608 (Electronic) Linking ISSN: 13657852 NLM ISO Abbreviation: Prostate Cancer Prostatic Dis Subsets: MEDLINE

High-throughput Interpretation of Killer-cell Immunoglobulin-like Receptor Short-read Sequencing Data with PING.

Authors: Marin, Wesley M. Dandekar, Ravi Augusto, Danillo G. et al.

Source: PLoS Computational Biology. 8/2/2021, Vol. 17 Issue 8, p1-23. 23p. 3 Diagrams, 3 Charts, 3 Graphs.

Deep learning identifies a T-cell exhaustion-dependent transcriptional signature for predicting clinical outcomes and response to immune checkpoint blockade.

Authors: Zhang, Zicheng Chen, Hongyan Yan, Dongxue et al.

Source: Oncogenesis. 7/11/2023, Vol. 12 Issue 1, p1-11. 11p.

Predicting MHC-I ligands across alleles and species: how far can we go?

Authors: Tadros, Daniel M. Racle, Julien Gfeller, David

Source: Genome Medicine. 3/20/2025, Vol. 17 Issue 1, p1-13. 13p.

S100P is a core gene for diagnosing and predicting the prognosis of sepsis.

Authors: Shen, Yu Zhou Li, Hai Li Hu, Ying Chun

Source: Scientific Reports. 2/25/2025, Vol. 15 Issue 1, p1-22. 22p.

Pervasiveness of HLA allele-specific expression loss across tumor types.

Authors: Filip, Ioan Wang, Anqi Kravets, Oleksandr et al.

Source: Genome Medicine. 2/13/2023, Vol. 15 Issue 1, p1-12. 12p.