Search Results - "Replogle JM"

Author Correction: Efficient C•G-to-G•C base editors developed using CRISPRi screens, target-library analysis, and machine learning.

Authors: Koblan LW Arbab M Shen MW et al.

Source: Nature biotechnology [Nat Biotechnol] 2023 Nov; Vol. 41 (11), pp. 1655.

Publication Type: Published Erratum

Journal Info: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE; PubMed not MEDLINE

Monoallelic TYROBP deletion is a novel risk factor for Alzheimer's disease.

Authors: Martiskainen, Henna Willman, Roosa-Maria Harju, Päivi et al.

Source: Molecular Neurodegeneration. 4/29/2025, Vol. 20 Issue 1, p1-22. 22p.

BINSEQ: A family of high-performance binary formats for nucleotide sequences.

Authors: Teyssier, Noam Dobin, Alexander

Source: PLoS Computational Biology. 5/28/2026, Vol. 22 Issue 5, p1-19. 19p.

Dissecting the host determinants of orthoflavivirus infection using QIC-seq.

Authors: Dupzyk, Allison J. Waldman, Benjamin S. Zengel, James et al.

Source: PLoS Pathogens. 6/26/2026, Vol. 22 Issue 6, p1-23. 23p.

Learning genetic perturbation effects with variational causal inference.

Authors: Liu, Emily Zhang, Jiaqi Uhler, Caroline

Source: PLoS Computational Biology. 2/2/2026, Vol. 22 Issue 2, p1-15. 15p.

Aneuploidy alleviates the cell proliferation defect caused by mutations affecting origin licensing in Saccharomyces cerevisiae.

Authors: La Roche Saint-André, Christophe de¹ (AUTHOR) christophe.laroche@inserm.fr

Source: PLoS Genetics. 2/27/2026, Vol. 22 Issue 2, p1-25. 25p.

Neurodegeneration risk variants promote lysosomal TMEM106B fibril accumulation.

Authors: Replogle JM Marks JD Fernandez MG et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 Mar 28. Date of Electronic Publication: 2026 Mar 28.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Gene regulatory network structure informs the distribution of perturbation effects.

Authors: Aguirre, Matthew Spence, Jeffrey P. Sella, Guy et al.

Source: PLoS Computational Biology. 9/2/2025, Vol. 21 Issue 9, p1-31. 31p.

Strain background interacts with chromosome 7 aneuploidy to determine commensal and virulence phenotypes in Candida albicans.

Authors: Mishra, Abhishek Solis, Norma V. Dietz, Siobhan M. et al.

Source: PLoS Genetics. 6/27/2025, Vol. 21 Issue 6, p1-21. 21p.

A new perspective on population genetics: Deciphering the relationship between genetic variants and disease prevalence in Psoriasis.

Authors: Zhang, Yuanjing Li, Weiran Wang, Wanrong et al.

Source: PLoS ONE. 3/13/2026, Vol. 21 Issue 3, p1-19. 19p.

A practical guide to targeted single-cell RNA sequencing technologies.

Authors: Moro, Giulia Brunner, Erich Basler, Konrad

Source: Communications Biology. 2/14/2026, Vol. 9 Issue 1, p1-19. 19p.

Transcriptome-wide root causal inference.

Authors: Strobl, Eric V. Gamazon, Eric R.

Source: PLoS Computational Biology. 9/2/2025, Vol. 21 Issue 9, p1-35. 35p.

Establishment of an RPA-CRISPR/Cas12a combined diagnostic system for Pneumocystis jirovecii pneumonia.

Authors: Wu, Yun Shao, Yuhan Li, Wei et al.

Source: PLoS Neglected Tropical Diseases. 3/18/2025, Vol. 19 Issue 3, p1-12. 12p.

ZAP targets aberrant mRNA transcripts encoding proteins with defective signal peptides for degradation.

Authors: Shah A Coria AR Membréno BS et al.

Source: The EMBO journal [EMBO J] 2026 Apr; Vol. 45 (8), pp. 2638-2665. Date of Electronic Publication: 2026 Mar 12.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8208664 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1460-2075 (Electronic) Linking ISSN: 02614189 NLM ISO Abbreviation: EMBO J Subsets: MEDLINE

Building, benchmarking, and exploring perturbative maps of transcriptional and morphological data.

Authors: Celik, Safiye Hütter, Jan-Christian Carlos, Sandra Melo et al.

Source: PLoS Computational Biology. 10/01/2024, Vol. 20 Issue 10, p1-24. 24p.

Transcriptome-wide analysis of differential expression in perturbation atlases.

Authors: Nadig A Replogle JM Pogson AN et al.

Source: Nature genetics [Nat Genet] 2025 May; Vol. 57 (5), pp. 1228-1237. Date of Electronic Publication: 2025 Apr 21.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Co Country of Publication: United States NLM ID: 9216904 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1718 (Electronic) Linking ISSN: 10614036 NLM ISO Abbreviation: Nat Genet Subsets: MEDLINE

Analytical dissection of CRISPR-Cas9-mediated gene editing fidelity: integrating next-generation bioanalytical platforms for precision immunotherapeutics and rare disease correction.

Authors: Mukherjee, Arpita¹ (AUTHOR) arpitamukherjee1987@rediffmail.com

Source: Journal of Rare Diseases. 7/20/2026, Vol. 5 Issue 1, p1-23. 23p.

Inducible CRISPR/Cas systems in precision oncology: Current applications and future perspectives.

Authors: Ding, Ziliang Wei, Yukun Han, Yong et al.

Source: Clinical & Translational Medicine. Jun2026, Vol. 16 Issue 6, p1-30. 30p.

Cytokine expression profile in the human brain of older adults.

Authors: Godoy, Juliana Beker Vialle, Ricardo A. dos Santos, Loren et al.

Source: Journal of Neuroinflammation. 10/3/2025, Vol. 22 Issue 1, p1-16. 16p.

Creating microalgal mutants by breaking DNA with Zeocin: A mini review.

Authors: Liu, Hang Guo, Li Jiang, Si et al.

Source: Journal of Applied Phycology. Oct2025, Vol. 37 Issue 5, p3463-3471. 9p.