Search Results - "Ruby EG"

SypC, a symbiont outer membrane vesicle protein, impacts the development of the squid-vibrio partnership.

Authors: Kuwabara JT Beilinson V Hargadon AC et al.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2026 Mar 17; Vol. 123 (11), pp. e2524648123. Date of Electronic Publication: 2026 Mar 11.

Publication Type: Journal Article

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

Developmental and transcriptomic responses of Hawaiian bobtail squid early stages to ocean warming and acidification.

Authors: Otjacques E Paula JR Ruby EG et al.

Source: Proceedings. Biological sciences [Proc Biol Sci] 2025 Dec 17; Vol. 292 (2061).

Publication Type: Journal Article

Journal Info: Publisher: Royal Society of London Country of Publication: England NLM ID: 101245157 Publication Model: Print Cited Medium: Internet ISSN: 1471-2954 (Electronic) Linking ISSN: 09628452 NLM ISO Abbreviation: Proc Biol Sci Subsets: MEDLINE

Strain matters: host responses reflect symbiont origin in the squid-vibrio symbiosis.

Authors: Beilinson V Chen GY Hargadon AC et al.

Source: MSystems [mSystems] 2025 Dec 17; Vol. 10 (12), pp. e0049825. Date of Electronic Publication: 2025 Nov 17.

Publication Type: Journal Article

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5077 (Electronic) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: MEDLINE

Mutant gltS alleles enable a Vibrio fischeri D-glutamate auxotroph to grow with lower requirements for exogenous D-glutamate.

Authors: Coppinger M Helm RF Yang L et al.

Source: Microbiology spectrum [Microbiol Spectr] 2025 Oct 07; Vol. 13 (10), pp. e0102525. Date of Electronic Publication: 2025 Sep 04.

Publication Type: Journal Article

Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE

Application of hsp60 amplicon sequencing to characterize microbial communities associated with juvenile and adult Euprymna scolopes squid.

Authors: Smith S Bongrand C Lawhorn S et al.

Source: ISME communications [ISME Commun] 2025 Jun 13; Vol. 5 (1), pp. ycaf085. Date of Electronic Publication: 2025 Jun 13 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918205372406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2730-6151 (Electronic) Linking ISSN: 27306151 NLM ISO Abbreviation: ISME Commun Subsets: PubMed not MEDLINE

Maturation state of colonization sites promotes symbiotic resiliency in the Euprymna scolopes-Vibrio fischeri partnership.

Authors: Essock-Burns T Lawhorn S Wu L et al.

Source: Microbiome [Microbiome] 2023 Mar 31; Vol. 11 (1), pp. 68. Date of Electronic Publication: 2023 Mar 31.

Publication Type: Video-Audio Media; Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618 (Electronic) Linking ISSN: 20492618 NLM ISO Abbreviation: Microbiome Subsets: MEDLINE

An acidic microenvironment produced by the V-type ATPase of Euprymna scolopes promotes specificity during Vibrio fischeri recruitment.

Authors: Hargadon AC Viliunas JW Koehler S et al.

Source: Communications biology [Commun Biol] 2024 Dec 18; Vol. 7 (1), pp. 1642. Date of Electronic Publication: 2024 Dec 18.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN: 2399-3642 (Electronic) Linking ISSN: 23993642 NLM ISO Abbreviation: Commun Biol Subsets: MEDLINE

Developmental and transcriptomic responses of Hawaiian bobtail squid early stages to ocean warming and acidification.

Authors: Otjacques E Paula JR Ruby EG et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Nov 02. Date of Electronic Publication: 2024 Nov 02.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Application of hsp60 amplicon sequencing to characterize microbial communities associated with juvenile and adult Euprymna scolopes squid.

Authors: Smith S Bongrand C Lawhorn S et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Sep 25. Date of Electronic Publication: 2024 Sep 25.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

The noncoding small RNA SsrA is released by Vibrio fischeri and modulates critical host responses.

Authors: Moriano-Gutierrez S Bongrand C Essock-Burns T et al.

Source: PLoS biology [PLoS Biol] 2020 Nov 03; Vol. 18 (11), pp. e3000934. Date of Electronic Publication: 2020 Nov 03 (Print Publication: 2020).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol Subsets: MEDLINE

Tracking the cargo of extracellular symbionts into host tissues with correlated electron microscopy and nanoscale secondary ion mass spectrometry imaging.

Authors: Cohen SK Aschtgen MS Lynch JB et al.

Source: Cellular microbiology [Cell Microbiol] 2020 Apr; Vol. 22 (4), pp. e13177.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley Country of Publication: United States NLM ID: 100883691 Publication Model: Print Cited Medium: Internet ISSN: 1462-5822 (Electronic) Linking ISSN: 14625814 NLM ISO Abbreviation: Cell Microbiol Subsets: MEDLINE

Insights into flagellar function and mechanism from the squid-vibrio symbiosis.

Authors: Aschtgen MS Brennan CA Nikolakakis K et al.

Source: NPJ biofilms and microbiomes [NPJ Biofilms Microbiomes] 2019 Oct 25; Vol. 5 (1), pp. 32. Date of Electronic Publication: 2019 Oct 25 (Print Publication: 2019).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Review

Journal Info: Publisher: Nature Publishing Group Country of Publication: United States NLM ID: 101666944 Publication Model: eCollection Cited Medium: Internet ISSN: 2055-5008 (Electronic) Linking ISSN: 20555008 NLM ISO Abbreviation: NPJ Biofilms Microbiomes Subsets: MEDLINE

Acidic pH promotes lipopolysaccharide modification and alters colonization in a bacteria-animal mutualism.

Authors: Schwartzman JA Lynch JB Flores Ramos S et al.

Source: Molecular microbiology [Mol Microbiol] 2019 Oct; Vol. 112 (4), pp. 1326-1338. Date of Electronic Publication: 2019 Aug 27.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 8712028 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-2958 (Electronic) Linking ISSN: 0950382X NLM ISO Abbreviation: Mol Microbiol Subsets: MEDLINE

Ciliated epithelia are key elements in the recruitment of bacterial partners in the squid-vibrio symbiosis.

Authors: Gundlach KA Nawroth J Kanso E et al.

Source: Frontiers in cell and developmental biology [Front Cell Dev Biol] 2022 Oct 20; Vol. 10, pp. 974213. Date of Electronic Publication: 2022 Oct 20 (Print Publication: 2022).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Media S.A Country of Publication: Switzerland NLM ID: 101630250 Publication Model: eCollection Cited Medium: Print ISSN: 2296-634X (Print) Linking ISSN: 2296634X NLM ISO Abbreviation: Front Cell Dev Biol Subsets: PubMed not MEDLINE

Transitioning to confined spaces impacts bacterial swimming and escape response.

Authors: Lynch JB James N McFall-Ngai M et al.

Source: Biophysical journal [Biophys J] 2022 Jul 05; Vol. 121 (13), pp. 2653-2662. Date of Electronic Publication: 2022 Apr 06.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 0370626 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1542-0086 (Electronic) Linking ISSN: 00063495 NLM ISO Abbreviation: Biophys J Subsets: MEDLINE

Evidence of Genomic Diversification in a Natural Symbiotic Population Within Its Host.

Authors: Bongrand C Koch E Mende D et al.

Source: Frontiers in microbiology [Front Microbiol] 2022 Mar 01; Vol. 13, pp. 854355. Date of Electronic Publication: 2022 Mar 01 (Print Publication: 2022).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE

Independent host- and bacterium-based determinants protect a model symbiosis from phage predation.

Authors: Lynch JB Bennett BD Merrill BD et al.

Source: Cell reports [Cell Rep] 2022 Feb 15; Vol. 38 (7), pp. 110376.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101573691 Publication Model: Print Cited Medium: Internet ISSN: 2211-1247 (Electronic) NLM ISO Abbreviation: Cell Rep Subsets: MEDLINE

Bacterial Quorum-Sensing Regulation Induces Morphological Change in a Key Host Tissue during the Euprymna scolopes-Vibrio fischeri Symbiosis.

Authors: Essock-Burns T Bennett BD Arencibia D et al.

Source: MBio [mBio] 2021 Oct 26; Vol. 12 (5), pp. e0240221. Date of Electronic Publication: 2021 Sep 28.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101519231 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2150-7511 (Electronic) NLM ISO Abbreviation: mBio Subsets: MEDLINE

A lasting symbiosis: how Vibrio fischeri finds a squid partner and persists within its natural host.

Authors: Visick KL Stabb EV Ruby EG

Source: Nature reviews. Microbiology [Nat Rev Microbiol] 2021 Oct; Vol. 19 (10), pp. 654-665. Date of Electronic Publication: 2021 Jun 04.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.; Review

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101190261 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1740-1534 (Electronic) Linking ISSN: 17401526 NLM ISO Abbreviation: Nat Rev Microbiol Subsets: MEDLINE

MICROBIOME. A unified initiative to harness Earth's microbiomes.

Authors: Alivisatos AP Blaser MJ Brodie EL et al.

Corporate Authors: Alivisatos AP Blaser MJ Brodie EL et al.

Source: Science (New York, N.Y.) [Science] 2015 Oct 30; Vol. 350 (6260), pp. 507-8. Date of Electronic Publication: 2015 Oct 28.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE