Search Results - "Rustad TR"

LysG-driven transcriptional network rewiring underlies lineage-specific phenotypes in Mycobacterium tuberculosis.

Authors: Banaei-Esfahani A Borrell S Trauner A et al.

Source: Nature communications [Nat Commun] 2026 Mar 23; Vol. 17 (1). Date of Electronic Publication: 2026 Mar 23.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Predicting fitness in Mycobacterium tuberculosis with transcriptional regulatory network-informed interpretable machine learning.

Authors: Bustad E Petry E Gu O et al.

Source: Frontiers in tuberculosis [Front Tuberc] 2025; Vol. 3. Date of Electronic Publication: 2025 Apr 02.

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Media S.A Country of Publication: Switzerland NLM ID: 9918697582306676 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2813-7868 (Electronic) Linking ISSN: 28137868 NLM ISO Abbreviation: Front Tuberc Subsets: PubMed not MEDLINE

Predicting bacterial fitness in Mycobacterium tuberculosis with transcriptional regulatory network-informed interpretable machine learning.

Authors: Bustad E Petry E Gu O et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Sep 25. Date of Electronic Publication: 2024 Sep 25.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Integrated Modeling of Gene Regulatory and Metabolic Networks in Mycobacterium tuberculosis.

Authors: Ma S Minch KJ Rustad TR et al.

Source: PLoS computational biology [PLoS Comput Biol] 2015 Nov 30; Vol. 11 (11), pp. e1004543. Date of Electronic Publication: 2015 Nov 30 (Print Publication: 2015).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Ultra-low Dose Aerosol Infection of Mice with Mycobacterium tuberculosis More Closely Models Human Tuberculosis.

Authors: Plumlee CR Duffy FJ Gern BH et al.

Source: Cell host & microbe [Cell Host Microbe] 2021 Jan 13; Vol. 29 (1), pp. 68-82.e5. Date of Electronic Publication: 2020 Nov 02.

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101302316 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1934-6069 (Electronic) Linking ISSN: 19313128 NLM ISO Abbreviation: Cell Host Microbe Subsets: MEDLINE

Transcriptional regulator-induced phenotype screen reveals drug potentiators in Mycobacterium tuberculosis.

Authors: Ma S Morrison R Hobbs SJ et al.

Source: Nature microbiology [Nat Microbiol] 2021 Jan; Vol. 6 (1), pp. 44-50. Date of Electronic Publication: 2020 Nov 16.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2058-5276 (Electronic) Linking ISSN: 20585276 NLM ISO Abbreviation: Nat Microbiol Subsets: MEDLINE

The DNA-binding network of Mycobacterium tuberculosis.

Authors: Minch KJ Rustad TR Peterson EJ et al.

Source: Nature communications [Nat Commun] 2015 Jan 12; Vol. 6, pp. 5829. Date of Electronic Publication: 2015 Jan 12.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Global analysis of mRNA stability in Mycobacterium tuberculosis.

Authors: Rustad TR Minch KJ Brabant W et al.

Source: Nucleic acids research [Nucleic Acids Res] 2013 Jan 07; Vol. 41 (1), pp. 509-17. Date of Electronic Publication: 2012 Nov 03.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Hypoxia induces an immunodominant target of tuberculosis specific T cells absent from common BCG vaccines.

Authors: Gideon HP Wilkinson KA Rustad TR et al.

Source: PLoS pathogens [PLoS Pathog] 2010 Dec 23; Vol. 6 (12), pp. e1001237. Date of Electronic Publication: 2010 Dec 23.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238921 Publication Model: Electronic Cited Medium: Internet ISSN: 1553-7374 (Electronic) Linking ISSN: 15537366 NLM ISO Abbreviation: PLoS Pathog Subsets: MEDLINE

Characterization of a Clp protease gene regulator and the reaeration response in Mycobacterium tuberculosis.

Authors: Sherrid AM Rustad TR Cangelosi GA et al.

Source: PloS one [PLoS One] 2010 Jul 16; Vol. 5 (7), pp. e11622. Date of Electronic Publication: 2010 Jul 16.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: Electronic Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Hypoxia: a window into Mycobacterium tuberculosis latency.

Authors: Rustad TR Sherrid AM Minch KJ et al.

Source: Cellular microbiology [Cell Microbiol] 2009 Aug; Vol. 11 (8), pp. 1151-9. Date of Electronic Publication: 2009 Apr 15.

Publication Type: Journal Article; Review

Journal Info: Publisher: Wiley Country of Publication: United States NLM ID: 100883691 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1462-5822 (Electronic) Linking ISSN: 14625814 NLM ISO Abbreviation: Cell Microbiol Subsets: MEDLINE

The enduring hypoxic response of Mycobacterium tuberculosis.

Authors: Rustad TR Harrell MI Liao R et al.

Source: PloS one [PLoS One] 2008 Jan 30; Vol. 3 (1), pp. e1502. Date of Electronic Publication: 2008 Jan 30.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: Electronic Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

The Candida albicans mating type like locus [MTL] is not involved in chlamydospore formation.

Authors: Rustad TR Choiniere JH Howard DH et al.

Source: Medical mycology [Med Mycol] 2006 Nov; Vol. 44 (7), pp. 677-81.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9815835 Publication Model: Print Cited Medium: Print ISSN: 1369-3786 (Print) Linking ISSN: 13693786 NLM ISO Abbreviation: Med Mycol Subsets: MEDLINE

A comprehensive map of genome-wide gene regulation in Mycobacterium tuberculosis.

Authors: Turkarslan S Peterson EJ Rustad TR et al.

Source: Scientific data [Sci Data] 2015 Mar 31; Vol. 2, pp. 150010. Date of Electronic Publication: 2015 Mar 31 (Print Publication: 2015).

Publication Type: Dataset; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: eCollection Cited Medium: Print ISSN: 2052-4463 (Print) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Mapping and manipulating the Mycobacterium tuberculosis transcriptome using a transcription factor overexpression-derived regulatory network.

Authors: Rustad TR Minch KJ Ma S et al.

Source: Genome biology [Genome Biol] 2014; Vol. 15 (11), pp. 502.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Print Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Osmosensory signaling in Mycobacterium tuberculosis mediated by a eukaryotic-like Ser/Thr protein kinase.

Authors: Hatzios SK Baer CE Rustad TR et al.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2013 Dec 24; Vol. 110 (52), pp. E5069-77. Date of Electronic Publication: 2013 Dec 05.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

Bioinformatic and empirical analysis of novel hypoxia-inducible targets of the human antituberculosis T cell response.

Authors: Gideon HP Wilkinson KA Rustad TR et al.

Source: Journal of immunology (Baltimore, Md. : 1950) [J Immunol] 2012 Dec 15; Vol. 189 (12), pp. 5867-76. Date of Electronic Publication: 2012 Nov 19.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 2985117R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1550-6606 (Electronic) Linking ISSN: 00221767 NLM ISO Abbreviation: J Immunol Subsets: MEDLINE

Isolation of mycobacterial RNA.

Authors: Rustad TR Roberts DM Liao RP et al.

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2009; Vol. 465, pp. 13-21.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

Genes required for intrinsic multidrug resistance in Mycobacterium avium.

Authors: Philalay JS Palermo CO Hauge KA et al.

Source: Antimicrobial agents and chemotherapy [Antimicrob Agents Chemother] 2004 Sep; Vol. 48 (9), pp. 3412-8.

Publication Type: Journal Article; Research Support, U.S. Gov't, P.H.S.

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 0315061 Publication Model: Print Cited Medium: Print ISSN: 0066-4804 (Print) Linking ISSN: 00664804 NLM ISO Abbreviation: Antimicrob Agents Chemother Subsets: MEDLINE

Homozygosity at the Candida albicans MTL locus associated with azole resistance.

Authors: Rustad TR Stevens DA Pfaller MA et al.

Source: Microbiology (Reading, England) [Microbiology (Reading)] 2002 Apr; Vol. 148 (Pt 4), pp. 1061-1072.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.

Journal Info: Publisher: Microbiology Society Country of Publication: England NLM ID: 9430468 Publication Model: Print Cited Medium: Print ISSN: 1350-0872 (Print) Linking ISSN: 13500872 NLM ISO Abbreviation: Microbiology (Reading) Subsets: MEDLINE