Search Results - "Simison M"

Data navigation on the ENCODE portal.

Authors: Kagda MS Lam B Litton C et al.

Source: Nature communications [Nat Commun] 2025 Oct 30; Vol. 16 (1), pp. 9592. Date of Electronic Publication: 2025 Oct 30.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources.

Authors: Engel SR Wong ED Nash RS et al.

Source: Genetics [Genetics] 2022 Apr 04; Vol. 220 (4).

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 0374636 Publication Model: Print Cited Medium: Internet ISSN: 1943-2631 (Electronic) Linking ISSN: 00166731 NLM ISO Abbreviation: Genetics Subsets: MEDLINE

Transcriptome visualization and data availability at the Saccharomyces Genome Database.

Authors: Ng PC Wong ED MacPherson KA et al.

Source: Nucleic acids research [Nucleic Acids Res] 2020 Jan 08; Vol. 48 (D1), pp. D743-D748.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

The ENCODE Uniform Analysis Pipelines.

Authors: Hitz BC Lee JW Jolanki O et al.

Source: Research square [Res Sq] 2023 Jul 19. Date of Electronic Publication: 2023 Jul 19.

Publication Type: Preprint; Journal Article

Journal Info: Country of Publication: United States NLM ID: 101768035 Publication Model: Electronic Cited Medium: Internet ISSN: 2693-5015 (Electronic) Linking ISSN: 26935015 NLM ISO Abbreviation: Res Sq Subsets: PubMed not MEDLINE

The ENCODE Uniform Analysis Pipelines.

Authors: Hitz BC Jin-Wook L Jolanki O et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2023 Apr 06. Date of Electronic Publication: 2023 Apr 06.

Publication Type: Preprint; Journal Article

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Saccharomyces genome database informs human biology.

Authors: Skrzypek MS Nash RS Wong ED et al.

Source: Nucleic acids research [Nucleic Acids Res] 2018 Jan 04; Vol. 46 (D1), pp. D736-D742.

Publication Type: Comparative Study; Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res

The Candida Genome Database (CGD): incorporation of Assembly 22, systematic identifiers and visualization of high throughput sequencing data.

Authors: Skrzypek MS Binkley J Binkley G et al.

Source: Nucleic acids research [Nucleic Acids Res] 2017 Jan 04; Vol. 45 (D1), pp. D592-D596. Date of Electronic Publication: 2016 Oct 13.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Ontology application and use at the ENCODE DCC.

Authors: Malladi VS Erickson DT Podduturi NR et al.

Source: Database : the journal of biological databases and curation [Database (Oxford)] 2015 Mar 16; Vol. 2015. Date of Electronic Publication: 2015 Mar 16 (Print Publication: 2015).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Review

Journal Info: Publisher: Oxford Journals Country of Publication: England NLM ID: 101517697 Publication Model: Electronic-Print Cited Medium: Internet ISSN: 1758-0463 (Electronic) Linking ISSN: 17580463 NLM ISO Abbreviation: Database (Oxford) Subsets: MEDLINE

The Candida Genome Database: the new homology information page highlights protein similarity and phylogeny.

Authors: Binkley J Arnaud MB Inglis DO et al.

Source: Nucleic acids research [Nucleic Acids Res] 2014 Jan; Vol. 42 (Database issue), pp. D711-6. Date of Electronic Publication: 2013 Oct 31.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations.

Authors: Cerqueira GC Arnaud MB Inglis DO et al.

Source: Nucleic acids research [Nucleic Acids Res] 2014 Jan; Vol. 42 (Database issue), pp. D705-10. Date of Electronic Publication: 2013 Nov 04.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources.

Authors: Arnaud MB Cerqueira GC Inglis DO et al.

Source: Nucleic acids research [Nucleic Acids Res] 2012 Jan; Vol. 40 (Database issue), pp. D653-9. Date of Electronic Publication: 2011 Nov 12.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Saccharomyces Genome Database: the genomics resource of budding yeast.

Authors: Cherry JM Hong EL Amundsen C et al.

Source: Nucleic acids research [Nucleic Acids Res] 2012 Jan; Vol. 40 (Database issue), pp. D700-5. Date of Electronic Publication: 2011 Nov 21.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

The Candida genome database incorporates multiple Candida species: multispecies search and analysis tools with curated gene and protein information for Candida albicans and Candida glabrata.

Authors: Inglis DO Arnaud MB Binkley J et al.

Source: Nucleic acids research [Nucleic Acids Res] 2012 Jan; Vol. 40 (Database issue), pp. D667-74. Date of Electronic Publication: 2011 Nov 07.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

The reference genome sequence of Saccharomyces cerevisiae: then and now.

Authors: Engel SR Dietrich FS Fisk DG et al.

Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2014 Mar 20; Vol. 4 (3), pp. 389-98. Date of Electronic Publication: 2014 Mar 20.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Electronic Cited Medium: Internet ISSN: 2160-1836 (Electronic) Linking ISSN: 21601836 NLM ISO Abbreviation: G3 (Bethesda) Subsets: MEDLINE

Testing the heterogeneity theory of late-life mortality plateaus by using cohorts of Drosophila melanogaster.

Authors: Drapeau MD Gass EK Simison MD et al.

Source: Experimental gerontology [Exp Gerontol] 2000 Feb; Vol. 35 (1), pp. 71-84.

Publication Type: Journal Article; Research Support, U.S. Gov't, P.H.S.

Journal Info: Publisher: Elsevier Science Country of Publication: England NLM ID: 0047061 Publication Model: Print Cited Medium: Print ISSN: 0531-5565 (Print) Linking ISSN: 05315565 NLM ISO Abbreviation: Exp Gerontol Subsets: MEDLINE