Search Results - "Sims AC"

ProteoMeter: a pipeline for integrating multi-PTM and limited proteolysis data to reveal modification-structure coupling at the residue level.

Authors: Rozum JC Sims AC Li X et al.

Source: NAR genomics and bioinformatics [NAR Genom Bioinform] 2026 Jul 14; Vol. 8 (3), pp. lqag073. Date of Electronic Publication: 2026 Jul 14 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: MEDLINE

Computationally Efficient Bayesian Estimation of Graphical Networks for Omics Data.

Authors: Adrian DW VonKaenel ED Obiri MY et al.

Source: Journal of proteome research [J Proteome Res] 2026 Jun 30. Date of Electronic Publication: 2026 Jun 30.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

Aggregation Methods for Quantifying PTM and Structural Changes in Bottom-Up Proteomics.

Authors: VonKaenel ED Rozum JC Zhang T et al.

Source: Journal of proteome research [J Proteome Res] 2026 Jun 05; Vol. 25 (6), pp. 3159-3167. Date of Electronic Publication: 2026 May 15.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

Human Coronavirus 229E Infection Alters Histone Proteoforms.

Authors: Ives AN Thibert S Berger MR et al.

Source: Journal of proteome research [J Proteome Res] 2026 Jun 05; Vol. 25 (6), pp. 2698-2708. Date of Electronic Publication: 2026 Apr 28.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

Correction: Proteome-wide characterization of PTMs reveals host cell responses to viral infection and identifies putative antiviral drug targets.

Authors: Li X Kabza A Ives AN et al.

Source: Frontiers in immunology [Front Immunol] 2025 Aug 12; Vol. 16, pp. 1672766. Date of Electronic Publication: 2025 Aug 12 (Print Publication: 2025).

Publication Type: Published Erratum

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE; In Process

Proteome-wide characterization of PTMs reveals host cell responses to viral infection and identifies putative antiviral drug targets.

Authors: Li X Kabza A Ives AN et al.

Source: Frontiers in immunology [Front Immunol] 2025 May 30; Vol. 16, pp. 1587106. Date of Electronic Publication: 2025 May 30 (Print Publication: 2025).

Publication Type: Journal Article; Review

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE

Scalable Bayesian Estimation of Multicondition Omics Networks via Clustering and Iterative Merging.

Authors: Obiri M VonKaenel ED Degnan DJ et al.

Source: Journal of the American Society for Mass Spectrometry [J Am Soc Mass Spectrom] 2026 Apr 01; Vol. 37 (4), pp. 934-942. Date of Electronic Publication: 2026 Mar 19.

Publication Type: Journal Article

Journal Info: Publisher: ACS Publications Country of Publication: United States NLM ID: 9010412 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-1123 (Electronic) Linking ISSN: 10440305 NLM ISO Abbreviation: J Am Soc Mass Spectrom Subsets: MEDLINE

Increased triacylglyceride and ceramide levels are key for MERS-CoV replication.

Authors: Mitchell HD Kyle J Engbrecht K et al.

Source: MSphere [mSphere] 2026 Feb 24; Vol. 11 (2), pp. e0052325. Date of Electronic Publication: 2026 Jan 15.

Publication Type: Journal Article

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101674533 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5042 (Electronic) Linking ISSN: 23795042 NLM ISO Abbreviation: mSphere Subsets: MEDLINE

Charting the Impact of Maternal Antibodies and Repeat Exposures on Sapovirus Immunity in Early Childhood From a Nicaraguan Birth Cohort.

Authors: Bucardo F Mallory ML González F et al.

Source: The Journal of infectious diseases [J Infect Dis] 2025 Feb 20; Vol. 231 (2), pp. 480-489.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 0413675 Publication Model: Print Cited Medium: Internet ISSN: 1537-6613 (Electronic) Linking ISSN: 00221899 NLM ISO Abbreviation: J Infect Dis Subsets: MEDLINE

Human Coronavirus-229E Hijacks Key Host-Cell RNA-Processing Complexes for Replication.

Authors: Sarkar S Feng S Mitchell HD et al.

Source: Journal of proteome research [J Proteome Res] 2025 Oct 03; Vol. 24 (10), pp. 5026-5045. Date of Electronic Publication: 2025 Sep 12.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

Harnessing Nanobodies for Precision Targeting of Proteoforms: Opportunities and Challenges in Therapeutics and Diagnostics.

Authors: Van Fossen EM Rodriguez O Berger M et al.

Source: ACS chemical biology [ACS Chem Biol] 2025 Aug 15; Vol. 20 (8), pp. 1817-1827. Date of Electronic Publication: 2025 Jul 24.

Publication Type: Journal Article; Review; Research Support, N.I.H., Intramural

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101282906 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1554-8937 (Electronic) Linking ISSN: 15548929 NLM ISO Abbreviation: ACS Chem Biol Subsets: MEDLINE

A compendium of multi-omics data illuminating host responses to lethal human virus infections.

Authors: Eisfeld AJ Anderson LN Fan S et al.

Source: Scientific data [Sci Data] 2024 Apr 02; Vol. 11 (1), pp. 328. Date of Electronic Publication: 2024 Apr 02.

Publication Type: Dataset; Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Dysregulation of lung epithelial cell homeostasis and immunity contributes to Middle East respiratory syndrome coronavirus disease severity.

Authors: Sims AC Schäfer A Okuda K et al.

Source: MSphere [mSphere] 2025 Feb 25; Vol. 10 (2), pp. e0095124. Date of Electronic Publication: 2025 Jan 30.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101674533 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5042 (Electronic) Linking ISSN: 23795042 NLM ISO Abbreviation: mSphere Subsets: MEDLINE

Beyond the List: Bioagent-Agnostic Signatures Could Enable a More Flexible and Resilient Biodefense Posture Than an Approach Based on Priority Agent Lists Alone.

Authors: Leiser OP Hobbs EC Sims AC et al.

Source: Pathogens (Basel, Switzerland) [Pathogens] 2021 Nov 17; Vol. 10 (11). Date of Electronic Publication: 2021 Nov 17.

Publication Type: Journal Article

Journal Info: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101596317 Publication Model: Electronic Cited Medium: Print ISSN: 2076-0817 (Print) Linking ISSN: 20760817 NLM ISO Abbreviation: Pathogens Subsets: PubMed not MEDLINE

Front-loading of anatomy content has no effect on long-term anatomy knowledge retention among physical therapy students: a prospective cohort study.

Authors: Amabile AH Nixon-Cave K Georgetti LJ et al.

Source: BMC medical education [BMC Med Educ] 2021 Sep 14; Vol. 21 (1), pp. 491. Date of Electronic Publication: 2021 Sep 14.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101088679 Publication Model: Electronic Cited Medium: Internet ISSN: 1472-6920 (Electronic) Linking ISSN: 14726920 NLM ISO Abbreviation: BMC Med Educ Subsets: MEDLINE

Hypergraph models of biological networks to identify genes critical to pathogenic viral response.

Authors: Feng S Heath E Jefferson B et al.

Source: BMC bioinformatics [BMC Bioinformatics] 2021 May 29; Vol. 22 (1), pp. 287. Date of Electronic Publication: 2021 May 29.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

Genetic Dissection of the Regulatory Mechanisms of Ace2 in the Infected Mouse Lung.

Authors: Xu F Gao J Bergmann S et al.

Source: Frontiers in immunology [Front Immunol] 2021 Jan 08; Vol. 11, pp. 607314. Date of Electronic Publication: 2021 Jan 08 (Print Publication: 2020).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE

Feasibility of Improving Global Health in Underserved Populations by Utilizing Service-Learning and Pro Bono Physical Therapy: A Systematic Review.

Authors: Hunter LN Sims AC Long R et al.

Source: Journal of allied health [J Allied Health] 2023 Winter; Vol. 52 (4), pp. 305-315.

Publication Type: Systematic Review; Journal Article

Journal Info: Publisher: Association of Schools of Allied Health Professions Country of Publication: United States NLM ID: 0361603 Publication Model: Print Cited Medium: Internet ISSN: 1945-404X (Electronic) Linking ISSN: 00907421 NLM ISO Abbreviation: J Allied Health Subsets: MEDLINE

Investigation of the Host Kinome Response to Coronavirus Infection Reveals PI3K/mTOR Inhibitors as Betacoronavirus Antivirals.

Authors: Fritch EJ Mordant AL Gilbert TSK et al.

Source: Journal of proteome research [J Proteome Res] 2023 Oct 06; Vol. 22 (10), pp. 3159-3177. Date of Electronic Publication: 2023 Aug 27.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

An orally bioavailable broad-spectrum antiviral inhibits SARS-CoV-2 in human airway epithelial cell cultures and multiple coronaviruses in mice.

Authors: Sheahan TP Sims AC Zhou S et al.

Source: Science translational medicine [Sci Transl Med] 2020 Apr 29; Vol. 12 (541). Date of Electronic Publication: 2020 Apr 06.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 101505086 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1946-6242 (Electronic) Linking ISSN: 19466234 NLM ISO Abbreviation: Sci Transl Med Subsets: MEDLINE