Search Results - "Skvortsov TA"

ProFlex as a linguistic bridge for decoding protein dynamics in normal mode analysis.

Authors: Magill DJ Skvortsov TA

Source: Nature communications [Nat Commun] 2025 Oct 13; Vol. 16 (1), pp. 9074. Date of Electronic Publication: 2025 Oct 13.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Genomic and biological characterization of lytic phages infecting Pseudomonas syringae associated with almond bacterial blast.

Authors: Hoang, Cuong V. Fan, Jonathan Lee, Hajun et al.

Source: Scientific Reports. 4/7/2026, Vol. 16 Issue 1, p1-20. 20p.

Acinetobacter phages use distinct strategies to breach the capsule barrier.

Authors: McCalla, Alexis J. Walker, Forrest C. Bisaro, Fabiana et al.

Source: PLoS Pathogens. 9/29/2025, Vol. 21 Issue 9, p1-31. 31p.

DepoScope: Accurate phage depolymerase annotation and domain delineation using large language models.

Authors: Concha-Eloko, Robby Stock, Michiel De Baets, Bernard et al.

Source: PLoS Computational Biology. 8/5/2024, Vol. 20 Issue 8, p1-15. 15p.

Mechanisms of bacterial inhibition and tolerance around cold atmospheric plasma.

Authors: Zhang, Hao Zhang, Chengxi Han, Qi

Source: Applied Microbiology & Biotechnology; Sep2023, Vol. 107 Issue 17, p5301-5316, 16p

Genome characterization and receptor-binding protein identification of Klebsiella phage vB_VIPKPNMC05, a member of a novel viral family Pituviridae.

Authors: Nada MAL Asejo AB Joloro MJG et al.

Source: Archives of virology [Arch Virol] 2026 Mar 10; Vol. 171 (4). Date of Electronic Publication: 2026 Mar 10.

Publication Type: Journal Article

Journal Info: Publisher: Springer-Verlag Country of Publication: Austria NLM ID: 7506870 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-8798 (Electronic) Linking ISSN: 03048608 NLM ISO Abbreviation: Arch Virol Subsets: MEDLINE

Identification of RNU44 as an Endogenous Reference Gene for Normalizing Cell-Free RNA in Tuberculosis.

Authors: Gu, Wei Tu, Xilin Lu, Weinan et al.

Source: Open Forum Infectious Diseases. Dec2022, Vol. 9 Issue 12, p1-10. 10p.

PPE50 variants as novel phylogeographic signatures of host-pathogen co-evolution in tuberculosis.

Authors: D'Souza, Christopher Phelan, Jody E. Gomez-Gonzalez, Paula-Josefina et al.

Source: Communications Biology. 7/9/2025, Vol. 8 Issue 1, p1-12. 12p.

Characterization of a virulent phage, P12L (genus Drulisvirus), targeting Klebsiella pneumoniae capsule type K2.

Authors: Rollon WD Dean TD Idris SIM et al.

Source: Archives of virology [Arch Virol] 2025 May 16; Vol. 170 (6), pp. 128. Date of Electronic Publication: 2025 May 16.

Publication Type: Journal Article

Journal Info: Publisher: Springer-Verlag Country of Publication: Austria NLM ID: 7506870 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-8798 (Electronic) Linking ISSN: 03048608 NLM ISO Abbreviation: Arch Virol Subsets: MEDLINE

The future of CRISPR in Mycobacterium tuberculosis infection.

Authors: Zein-Eddine, Rima Refrégier, Guislaine Cervantes, Jorge et al.

Source: Journal of Biomedical Science. 5/27/2023, Vol. 30 Issue 1, p1-12. 12p.

DposFinder: an interpretable transformer model for predicting phage-derived polysaccharide depolymerases and their host capsular serotypes.

Authors: Shen Y Lun H Zhang Y et al.

Source: Genome medicine [Genome Med] 2026 Apr 20; Vol. 18 (1). Date of Electronic Publication: 2026 Apr 20.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101475844 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-994X (Electronic) Linking ISSN: 1756994X NLM ISO Abbreviation: Genome Med Subsets: MEDLINE

Characterization, genomic insights and anti-biofilm potential of phage vB_PaeM_PKMS3, a lytic Pbunavirus capable of infecting clinical Pseudomonas aeruginosa isolates.

Authors: Mohan N Sritha KS Jose J et al.

Source: Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2026 Mar 25; Vol. 119 (4). Date of Electronic Publication: 2026 Mar 25.

Publication Type: Journal Article

Journal Info: Publisher: Springer Country of Publication: Netherlands NLM ID: 0372625 Publication Model: Electronic Cited Medium: Internet ISSN: 1572-9699 (Electronic) Linking ISSN: 00036072 NLM ISO Abbreviation: Antonie Van Leeuwenhoek Subsets: MEDLINE

From structure to design: experimental and AI-driven approaches in receptor-binding protein engineering for reprogramming phage host range.

Authors: Xu S Yang S Jiao X et al.

Source: Archives of microbiology [Arch Microbiol] 2026 Mar 17; Vol. 208 (6). Date of Electronic Publication: 2026 Mar 17.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 0410427 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-072X (Electronic) Linking ISSN: 03028933 NLM ISO Abbreviation: Arch Microbiol Subsets: MEDLINE

VapC toxin switches M. smegmatis cells into dormancy through 23S rRNA cleavage.

Authors: Zamakhaev, Mikhail Grigorov, Artem Bespyatykh, Julia et al.

Source: Archives of Microbiology. Jan2023, Vol. 205 Issue 1, p1-13. 13p.

Metatranscriptomic analysis reveals active microbes and genes responded to short-term Cr(VI) stress.

Authors: Yu, Zhengsheng Pei, Yaxin Zhao, Shuai et al.

Source: Ecotoxicology. Oct2021, Vol. 30 Issue 8, p1527-1537. 11p.

Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants.

Authors: Yang, Yiyan Dufault-Thompson, Keith Yan, Wei et al.

Source: GigaScience. 2024, Vol. 13 Issue 1, p1-14. 14p.

Understanding the bacteria in Mycobacterium avium complex (MAC) from a bioinformatic perspective – a review.

Authors: Banerjee, Anindita Karmakar, Mistu Sur, Saubashya

Source: Acta Biologica Szegediensis. 2023, Vol. 67 Issue 2, p203-220. 18p.

Modulatory Impact of the sRNA Mcr11 in Two Clinical Isolates of Mycobacterium tuberculosis.

Authors: Alvarez-Eraso, Karen L. F. Muñoz-Martínez, Laura M. Alzate, Juan F. et al.

Source: Current Microbiology. Feb2022, Vol. 79 Issue 2, p1-14. 14p.

Mycobacterial ethambutol responsive genes and implications in antibiotics resistance.

Authors: Xiang, Xiaohong Gong, Zhen Deng, Wanyan et al.

Source: Journal of Drug Targeting. Mar2021, Vol. 29 Issue 3, p284-293. 10p.

Revisiting the expression signature of pks15/1 unveils regulatory patterns controlling phenolphtiocerol and phenolglycolipid production in pathogenic mycobacteria.

Authors: Ramos, Beatriz Gordon, Stephen V. Cunha, Mónica V.

Source: PLoS ONE. 5/7/2020, Vol. 15 Issue 5, p1-22. 22p.