Search Results - "Taskiran II"

CREsted: modeling genomic and synthetic cell-type-specific enhancers across tissues and species.

Authors: Kempynck N De Winter S Blaauw CH et al.

Source: Nature methods [Nat Methods] 2026 May; Vol. 23 (5), pp. 946-959. Date of Electronic Publication: 2026 Apr 02.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

Expanding the fly eye gene regulatory network: From Drosophila to the hoverfly Episyrphus balteatus.

Authors: Navarro, Tomás Torres, Jesús Sáez-Moreno, Reinaldo et al.

Source: PLoS Genetics. 2/26/2026, Vol. 22 Issue 2, p1-33. 33p.

Loss of Pol III repressor Maf1 in neurons promotes longevity by preventing the age-related decline in 5S rRNA and translation.

Authors: Xu, Bowen Hull, Alexander Hill, Olivia N. M. et al.

Source: PLoS Biology. 7/15/2025, Vol. 23 Issue 7, p1-21. 21p.

Derepression of the epithelial transcription factor GRHL2 promotes direct hepatocyte-to-cholangiocyte transdifferentiation.

Authors: Vasseur, Ludivine Gheeraert, Céline Dubois-Chevalier, Julie et al.

Source: PLoS Biology. 12/12/2025, Vol. 23 Issue 12, p1-36. 36p.

Discovery of oligodendrocyte enhancers that regulate Sox10 expression.

Authors: An, Hongjoo Fan, Chuandong Kim, Dongkyeong et al.

Source: PLoS Genetics. 7/11/2025, Vol. 21 Issue 7, p1-21. 21p.

Generating information-dense promoter sequences with optimal string packing.

Authors: Andreani, Virgile South, Eric J. Dunlop, Mary J.

Source: PLoS Computational Biology. 7/24/2024, Vol. 20 Issue 7, p1-22. 22p.

SCRMshaw: Supervised cis-regulatory module prediction for insect genomes.

Authors: Asma, Hasiba Liu, Luna Halfon, Marc S.

Source: PLoS ONE. 12/5/2024, Vol. 19 Issue 12, p1-8. 8p.

NAD⁺ supply and redox state limit developmental speed in the Drosophila eye.

Authors: Veits N Guo Y He J et al.

Source: The EMBO journal [EMBO J] 2026 Jun; Vol. 45 (12), pp. 4094-4123. Date of Electronic Publication: 2026 May 13.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8208664 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1460-2075 (Electronic) Linking ISSN: 02614189 NLM ISO Abbreviation: EMBO J Subsets: MEDLINE

Transcription factor interactions explain the context-dependent activity of CRX binding sites.

Authors: Loell, Kaiser J. Friedman, Ryan Z. Myers, Connie A. et al.

Source: PLoS Computational Biology. 1/16/2024, Vol. 20 Issue 1, p1-25. 25p.

Opportunities for RNA sequencing in physiology: from big data to understanding homeostasis and heterogeneity.

Authors: Prokop, Jeremy W. Bilinovich, Stephanie M. Tokarski, Ember et al.

Source: Function. Feb2026, Vol. 7 Issue 1, p1-36. 36p.

Clock-dependent chromatin accessibility rhythms regulate circadian transcription.

Authors: Yuan, Ye Chen, Qianqian Brovkina, Margarita et al.

Source: PLoS Genetics. 5/28/2024, Vol. 20 Issue 5, p1-29. 29p.

Enhancer-based gene therapy: a new path for precision medicine.

Authors: Marei HE; Department of Cytology and Histology, Faculty of Veterinary Medicine, Mansoura University, Mansoura, 35116, Egypt. hanymarei@mans.edu.eg.

Source: Hereditas [Hereditas] 2026 Mar 21; Vol. 163 (1). Date of Electronic Publication: 2026 Mar 21.

Publication Type: Journal Article; Review

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 0374654 Publication Model: Electronic Cited Medium: Internet ISSN: 1601-5223 (Electronic) Linking ISSN: 00180661 NLM ISO Abbreviation: Hereditas Subsets: MEDLINE

Epigenetic and transcriptional dysregulation in CD4+ T cells in patients with atopic dermatitis.

Authors: Eapen, Amy A. Parameswaran, Sreeja Forney, Carmy et al.

Source: PLoS Genetics. 5/16/2022, Vol. 18 Issue 5, p1-21. 21p.

Genetic variation in chromatin state across multiple tissues in Drosophila melanogaster.

Authors: Huynh, Khoi Smith, Brittny R. Macdonald, Stuart J. et al.

Source: PLoS Genetics. 5/5/2023, Vol. 19 Issue 5, p1-28. 28p.

AITeQ: a machine learning framework for Alzheimer's prediction using a distinctive five-gene signature.

Authors: Ahammad, Ishtiaque Lamisa, Anika Bushra Bhattacharjee, Arittra et al.

Source: Briefings in Bioinformatics. Jul2024, Vol. 25 Issue 4, p1-14. 14p.

maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks.

Authors: Cazares, Tareian A. Rizvi, Faiz W. Iyer, Balaji et al.

Source: PLoS Computational Biology. 1/31/2023, Vol. 19 Issue 1, p1-36. 36p. 2 Diagrams, 3 Graphs, 1 Map.

Evolution of cetacean-specific conserved non-coding elements suggests their role in the limb changes during secondary aquatic adaptation.

Authors: Zhang, Zhenhua Yu, Zhenpeng Chong, Yujie et al.

Source: BMC Biology. 7/16/2025, Vol. 23 Issue 1, p1-17. 17p.

Epigenetic background of lineage-specific gene expression landscapes of four Staphylococcus aureus hospital isolates.

Authors: Korotetskiy, Ilya S. Shilov, Sergey V. Kuznetsova, Tatyana V. et al.

Source: PLoS ONE. 5/5/2025, Vol. 20 Issue 5, p1-24. 24p.

Bisphenol S Exposure and MASLD: A Mechanistic Study in Mice.

Authors: Shiqi Li Yun Fan Min Tang et al.

Source: Environmental Health Perspectives. May2025, Vol. 133 Issue 5, p057009-1-057009-14. 14p.

DNA methylation as a potential mediator of the association between indoor air pollution and neurodevelopmental delay in a South African birth cohort.

Authors: Feil, Dakotah Abrishamcar, Sarina Christensen, Grace M. et al.

Source: Clinical Epigenetics. 2/28/2023, Vol. 15 Issue 1, p1-14. 14p.