Search Results - "Theesfeld CL"

Author Correction: Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data.

Authors: Chen X Wang Y Cappuccio A et al.

Source: Nature computational science [Nat Comput Sci] 2023 Sep; Vol. 3 (9), pp. 805.

Publication Type: Published Erratum

Journal Info: Publisher: Springer Nature Country of Publication: United States NLM ID: 101775476 Publication Model: Print Cited Medium: Internet ISSN: 2662-8457 (Electronic) Linking ISSN: 26628457 NLM ISO Abbreviation: Nat Comput Sci Subsets: MEDLINE; PubMed not MEDLINE

DeepMethylation: A deep learning framework for tissue-specific DNA methylation prediction and functional variant annotation.

Authors: Li, Wenran Yu, Shijia Cheng, Yingyu et al.

Source: PLoS Computational Biology. 7/1/2026, Vol. 22 Issue 7, p1-20. 20p.

Chromatin insulators homie and nhomie can interact with distant copies either together or separately, with distinct outcomes for enhancer-promoter interactions.

Authors: Fujioka, Miki Ke, Wenfan Schedl, Paul et al.

Source: PLoS Genetics. 6/5/2026, Vol. 22 Issue 6, p1-27. 27p.

Model-based inference of cell cycle dynamics captures alterations of the DNA replication programme.

Authors: Alsina, Adolfo Fumasoni, Marco Sartori, Pablo

Source: PLoS Computational Biology. 10/14/2025, Vol. 21 Issue 10, p1-17. 17p.

Variant-resolved prediction of context-specific isoform variation with a graph-based attention model.

Authors: Litman A Pan Z Sokolova K et al.

Source: Cell genomics [Cell Genom] 2026 Apr 08; Vol. 6 (4), pp. 101126. Date of Electronic Publication: 2026 Jan 16.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier, Inc Country of Publication: United States NLM ID: 9918284260106676 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2666-979X (Electronic) Linking ISSN: 2666979X NLM ISO Abbreviation: Cell Genom Subsets: MEDLINE

HumanBase: an interactive AI platform for human biology.

Authors: Sealfon RSG Theesfeld CL Funk J et al.

Source: Nature methods [Nat Methods] 2026 Mar; Vol. 23 (3), pp. 483-484.

Publication Type: Letter

Journal Info: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE; In Process

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Trends and features of autism spectrum disorder research using artificial intelligence techniques: a bibliometric approach.

Authors: Zamit, Ibrahim Musa, Ibrahim Hussein Jiang, Limin et al.

Source: Current Psychology. Dec2023, Vol. 42 Issue 35, p31317-31332. 16p.

Neovascular age-related macular degeneration management – Beyond anti-VEGF.

Authors: Ayachit, Apoorva Rao, Shailesh Eqbal, Shadma et al.

Source: Indian Journal of Ophthalmology. May2026, Vol. 74 Issue 5, p653-660. 8p.

The role of chromatin state in intron retention: A case study in leveraging large scale deep learning models.

Authors: Daoud, Ahmed Ben-Hur, Asa

Source: PLoS Computational Biology. 1/10/2025, Vol. 21 Issue 1, p1-15. 15p.

Multi-phase, multi-ethnic GWAS uncovers putative loci in predisposition to elite sprint and power performance, health and disease.

Authors: Wang, Guan Fuku, Noriyuki Miyamoto-Mikami, Eri et al.

Source: Biology of Sport. 2025, Vol. 42 Issue 3, p141-159.

Decomposition of phenotypic heterogeneity in autism reveals underlying genetic programs.

Authors: Litman A Sauerwald N Green Snyder L et al.

Source: Nature genetics [Nat Genet] 2025 Jul; Vol. 57 (7), pp. 1611-1619. Date of Electronic Publication: 2025 Jul 09.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Co Country of Publication: United States NLM ID: 9216904 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1718 (Electronic) Linking ISSN: 10614036 NLM ISO Abbreviation: Nat Genet Subsets: MEDLINE

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A genome‐wide association study identifies novel association between genetic variants in GGT7 and LINC00944 and hypertension.

Authors: Tan, Chengcheng Zhang, Hongfu Yu, Dong et al.

Source: Clinical & Translational Medicine. May2021, Vol. 11 Issue 5, p1-6. 6p.

CXCR4⁺ mammary gland macrophageal niche promotes tumor initiating cell activity and immune suppression during tumorigenesis.

Authors: Lee E Hong JJ Samcam Vargas G et al.

Source: Nature communications [Nat Commun] 2025 May 25; Vol. 16 (1), pp. 4854. Date of Electronic Publication: 2025 May 25.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Unraveling key transposable elements in pathogen-induced bovine mastitis through comparative in vivo and in vitro transcriptomic analysis.

Authors: An, Songyan Mi, Siyuan Chen, Siqian et al.

Source: BMC Genomics. 7/1/2025, Vol. 26 Issue 1, p1-15. 15p.

Revisiting co-expression-based automated function prediction in yeast with neural networks and updated Gene Ontology annotations.

Authors: McGuire, Cole E. Hibbs, Matthew A.

Source: PLoS ONE. 4/16/2026, Vol. 21 Issue 4, p1-18. 18p.

Omics-guided bacterial engineering of Escherichia coli ER2566 for recombinant protein expression.

Authors: Zhou, Lizhi Ma, Yue Wang, Kaihang et al.

Source: Applied Microbiology & Biotechnology; Feb2023, Vol. 107 Issue 2/3, p853-865, 13p

ProtienCNN‐BLSTM: An efficient deep neural network with amino acid embedding‐based model of protein sequence classification and biological analysis.

Authors: Lilhore, Umesh Kumar Simaiya, Sarita Dalal, Surjeet et al.

Source: Computational Intelligence; Aug2024, Vol. 40 Issue 4, p1-38, 38p

Short tandem repeat expansions in cortical layer‐specific genes implicate in phenotypic severity and adaptability of autism spectrum disorder.

Authors: Kim, Jae Hyun Koh, In Gyeong Lee, Hyeji et al.

Source: Psychiatry & Clinical Neurosciences. Jul2024, Vol. 78 Issue 7, p405-415. 11p.

Subjects: Microsatellite repeats, Autism spectrum disorders, Phenotypic plasticity, Whole genome sequencing, Phenotypes, Gene frequency, Y chromosome