Search Results - "Typas, Athanasios"

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AlphaDesign: a de novo protein design framework based on AlphaFold.

Authors: Jendrusch, Michael A Yang, Alessio L J Cacace, Elisabetta et al.

Source: Molecular Systems Biology. Sep2025, Vol. 21 Issue 9, p1166-1189. 24p.

Towards a mechanistic understanding of reciprocal drug–microbiome interactions.

Authors: Zimmermann, Michael Patil, Kiran Raosaheb Typas, Athanasios et al.

Source: Molecular Systems Biology. Mar2021, Vol. 17 Issue 3, p1-15. 15p.

Bioactivity assessment of natural compounds using machine learning models trained on target similarity between drugs.

Authors: Periwal, Vinita Bassler, Stefan Andrejev, Sergej et al.

Source: PLoS Computational Biology. 4/25/2022, Vol. 18 Issue 4, p1-21. 21p. 4 Graphs.

Consistency across multi‐omics layers in a drug‐perturbed gut microbial community.

Authors: Wuyts, Sander Alves, Renato Zimmermann‐Kogadeeva, Maria et al.

Source: Molecular Systems Biology. 9/12/2023, Vol. 19 Issue 9, p1-17. 17p.

SARS‐CoV‐2 infection remodels the host protein thermal stability landscape.

Authors: Selkrig, Joel Stanifer, Megan Mateus, André et al.

Source: Molecular Systems Biology. Feb2021, Vol. 17 Issue 2, p1-13. 13p.

Unravelling metabolic cross‐feeding in a yeast–bacteria community using ¹³C‐based proteomics.

Authors: Gabrielli, Natalia Maga‐Nteve, Christoniki Kafkia, Eleni et al.

Source: Molecular Systems Biology. 4/12/2023, Vol. 19 Issue 4, p1-13. 13p.

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High-throughput, quantitative analyses of genetic interactions in E. coli.

Authors: Typas, Athanasios Nichols, Robert J. Siegele, Deborah A. et al.

Source: Nature Methods. Sep2008, Vol. 5 Issue 9, p781-787. 7p. 2 Diagrams, 1 Chart, 2 Graphs.

Thermal proteome profiling for interrogating protein interactions.

Authors: Mateus, André Kurzawa, Nils Becher, Isabelle et al.

Source: Molecular Systems Biology. Mar2020, Vol. 16 Issue 3, p1-11. 11p.

Interactions between extracellular vesicles and microbiome in human diseases: New therapeutic opportunities.

Authors: Luo, Rongjin Chang, Yanmin Liang, Huaizhen et al.

Source: iMeta. May2023, Vol. 2 Issue 2, p1-30. 30p.

The New Microbiology: an international lecture course on the island of Spetses.

Authors: Cossart, Pascale Kolter, Roberto Lemaitre, Bruno et al.

Source: MicroLife. 2023, Vol. 4, p1-8. 8p.

Fe-S Cluster Biosynthesis Controls Uptake of Aminoglycosides in a ROS-Less Death Pathway.

Authors: Ezraty, Benjamin Vergnes, Alexandra Banzhaf, Manuel et al.

Source: Science (pre-March 2025). 6/28/2013, Vol. 340 Issue 6140, p1583-1587. 5p.

A Chemical-Genomic Screen of Neglected Antibiotics Reveals Illicit Transport of Kasugamycin and Blasticidin S.

Authors: Shiver, Anthony L. Osadnik, Hendrik Kritikos, George et al.

Source: PLoS Genetics. 6/29/2016, Vol. 12 Issue 6, p1-19. 19p.

A Genome-Wide Screen for Bacterial Envelope Biogenesis Mutants Identifies a Novel Factor Involved in Cell Wall Precursor Metabolism.

Authors: Paradis-Bleau, Catherine Kritikos, George Orlova, Katya et al.

Source: PLoS Genetics. Jan2014, Vol. 10 Issue 1, p1-13. 13p.