Search Results - "Waalkes, Adam"

Whole Genome Sequencing of Peruvian Klebsiella pneumoniae Identifies Novel Plasmid Vectors Bearing Carbapenem Resistance Gene NDM-1.

Authors: Roach, David Waalkes, Adam Abanto, Jorge et al.

Source: Open Forum Infectious Diseases. Aug2020, Vol. 7 Issue 8, p1-8. 8p.

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Characterizing the molecular composition and diagnostic potential of Mycobacterium tuberculosis urinary cell-free DNA using next-generation sequencing.

Authors: Oreskovic, Amy Waalkes, Adam Holmes, Elizabeth A. et al.

Source: International Journal of Infectious Diseases. Nov2021, Vol. 112, p330-337. 8p.

The Rhododendron Genome and Chromosomal Organization Provide Insight into Shared Whole-Genome Duplications across the Heath Family (Ericaceae).

Authors: Soza, Valerie L Lindsley, Dale Waalkes, Adam et al.

Source: Genome Biology & Evolution; Dec2019, Vol. 11 Issue 12, p3353-3371, 19p

Open-Sourced CIViC Annotation Pipeline to Identify and Annotate Clinically Relevant Variants Using Single-Molecule Molecular Inversion Probes.

Authors: Barnell, Erica K. Waalkes, Adam Mosior, Matt C. et al.

Source: JCO Clinical Cancer Informatics. 10/16/2019, Vol. 3, p1-12. 12p.

Emergence of Dalbavancin, Vancomycin, and Daptomycin Cross-resistance in MRSA During Long-term LVAD Suppression With Vancomycin Followed by Dalbavancin: Genomic Insights and Synergy With Cefadroxil.

Authors: Stohs, Erica J Alexander, Bryan T Fey, Paul D et al.

Source: Open Forum Infectious Diseases. Mar2026, Vol. 13 Issue 3, p1-7. 7p.

Genomic reconstruction and directed interventions in a multidrug-resistant Shigellosis outbreak in Seattle, WA, USA: a genomic surveillance study.

Authors: Tansarli, Giannoula S Long, Dustin R Waalkes, Adam et al.

Source: Lancet Infectious Diseases. Jun2023, Vol. 23 Issue 6, p740-750. 11p.

Identification of a novel tedizolid resistance mutation in rpoB of MRSA after in vitro serial passage.

Authors: Shen, Tianwei Penewit, Kelsi Waalkes, Adam et al.

Source: Journal of Antimicrobial Chemotherapy (JAC). Feb2021, Vol. 76 Issue 2, p292-296. 5p.

Simulated exposures of oritavancin in in vitro pharmacodynamic models select for methicillin-resistant Staphylococcus aureus with reduced susceptibility to oritavancin but minimal cross-resistance or seesaw effect with other antimicrobials.

Authors: Werth, Brian J Zhang, Rutan Beltran, Ismael A Barreras et al.

Source: Journal of Antimicrobial Chemotherapy (JAC). Apr2025, Vol. 80 Issue 4, p1108-1115. 8p.

Emergence of Dalbavancin, Vancomycin, and Daptomycin Nonsusceptible Staphylococcus aureus in a Patient Treated With Dalbavancin: Case Report and Isolate Characterization.

Authors: Zhang, Rutan Polenakovik, Hari Beltran, Ismael A Barreras et al.

Source: Clinical Infectious Diseases. Nov2022, Vol. 75 Issue 9, p1641-1644. 4p.

Repeated isolation of an antibiotic-dependent and temperature-sensitive mutant of Pseudomonas aeruginosa from a cystic fibrosis patient.

Authors: Wolter, Daniel J Scott, Alison Armbruster, Catherine R et al.

Source: Journal of Antimicrobial Chemotherapy (JAC). Mar2021, Vol. 76 Issue 3, p616-625. 10p.

Occurrence of cross-resistance and β-lactam seesaw effect in glycopeptide-, lipopeptide- and lipoglycopeptide-resistant MRSA correlates with membrane phosphatidylglycerol levels.

Authors: Hines, Kelly M Shen, Tianwei Ashford, Nathaniel K et al.

Source: Journal of Antimicrobial Chemotherapy (JAC). May2020, Vol. 75 Issue 5, p1182-1186. 5p.

Dalbavancin exposure in vitro selects for dalbavancin-non-susceptible and vancomycin-intermediate strains of methicillin-resistant Staphylococcus aureus.

Authors: Werth, Brian J. Ashford, Nathaniel K. Penewit, Kelsi et al.

Source: Clinical Microbiology & Infection. Jun2021, Vol. 27 Issue 6, p910.e1-910.e8. 1p.

In vitro susceptibility of Stenotrophomonas maltophilia and other carbapenem non-susceptible Gram-negative rods in the Pacific Northwest to cefiderocol and aztreonam-avibactam.

Authors: Bryan A Shields-Pruiett M Berger H et al.

Source: JAC-antimicrobial resistance [JAC Antimicrob Resist] 2026 Jun 08; Vol. 8 (3), pp. dlag105. Date of Electronic Publication: 2026 Jun 08 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101765283 Publication Model: eCollection Cited Medium: Internet ISSN: 2632-1823 (Electronic) Linking ISSN: 26321823 NLM ISO Abbreviation: JAC Antimicrob Resist Subsets: PubMed not MEDLINE

If you give a mouse a poopsicle: a novel fecal microbiota transplant method for exploring the role of the gut microbiome in stress-related outcomes in mice.

Authors: Tschang MA Deo-Campo Vuong R Eilers B et al.

Source: Frontiers in immunology [Front Immunol] 2026 Apr 24; Vol. 17, pp. 1816919. Date of Electronic Publication: 2026 Apr 24 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE

Conserved and context-dependent changes in pathogen and host cell gene expression during Staphylococcus aureus intracellular infection.

Authors: Holmes EA Waalkes A Lewis JD et al.

Source: BMC microbiology [BMC Microbiol] 2026 Jun 15. Date of Electronic Publication: 2026 Jun 15.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100966981 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1471-2180 (Electronic) Linking ISSN: 14712180 NLM ISO Abbreviation: BMC Microbiol Subsets: MEDLINE

SIV/SARS-CoV-2 coinfection in rhesus macaques impacts viral shedding, host immunity, the microbiome, and viral evolution.

Authors: Fredericks MN Kolodner Z Waalkes A et al.

Source: Frontiers in immunology [Front Immunol] 2025 May 20; Vol. 16, pp. 1587688. Date of Electronic Publication: 2025 May 20 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE

Effects of Therapeutic Antibiotic Exposure on the Oropharyngeal and Fecal Microbiota in Infants With Cystic Fibrosis.

Authors: Hayden HS Nelson MT Ross SE et al.

Source: Pediatric pulmonology [Pediatr Pulmonol] 2025 Mar; Vol. 60 (3), pp. e71024.

Publication Type: Journal Article

Journal Info: Publisher: Wiley-Liss Country of Publication: United States NLM ID: 8510590 Publication Model: Print Cited Medium: Internet ISSN: 1099-0496 (Electronic) Linking ISSN: 10990496 NLM ISO Abbreviation: Pediatr Pulmonol Subsets: MEDLINE

Contribution of the patient microbiome to surgical site infection and antibiotic prophylaxis failure in spine surgery.

Authors: Long DR Bryson-Cahn C Waalkes A et al.

Source: Science translational medicine [Sci Transl Med] 2024 Apr 10; Vol. 16 (742), pp. eadk8222. Date of Electronic Publication: 2024 Apr 10.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 101505086 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1946-6242 (Electronic) Linking ISSN: 19466234 NLM ISO Abbreviation: Sci Transl Med Subsets: MEDLINE

Cell-Free DNA Detects Pseudomonas aeruginosa Lung Infection in Modulator-treated People with Cystic Fibrosis.

Authors: Long DR Holmes EA Goss CH et al.

Source: American journal of respiratory and critical care medicine [Am J Respir Crit Care Med] 2023 Nov 01; Vol. 208 (9), pp. 944-947.

Publication Type: Letter; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Thoracic Society Country of Publication: United States NLM ID: 9421642 Publication Model: Print Cited Medium: Internet ISSN: 1535-4970 (Electronic) Linking ISSN: 1073449X NLM ISO Abbreviation: Am J Respir Crit Care Med Subsets: MEDLINE