Search Results - "Yoder KE"

Effect of dextromethorphan, diphenhydramine, and placebo on nocturnal cough and sleep quality for coughing children and their parents.

Authors: Paul IM Yoder KE Crowell KR et al.

Source: Pediatrics. 2004 Jul Suppl, Vol. 114 Issue 1, pe85-90. 1p.

Retroviral intasome architecture shapes the dynamics of target DNA search and integration.

Authors: Baltierra-Jasso LE Larue RC Jones ND et al.

Source: PLoS pathogens [PLoS Pathog] 2026 Mar 20; Vol. 22 (3), pp. e1014070. Date of Electronic Publication: 2026 Mar 20 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238921 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7374 (Electronic) Linking ISSN: 15537366 NLM ISO Abbreviation: PLoS Pathog Subsets: MEDLINE

DNA strand breaks and gaps target retroviral intasome binding and integration.

Authors: Senavirathne G London J Gardner A et al.

Source: Nature communications [Nat Commun] 2023 Nov 03; Vol. 14 (1), pp. 7072. Date of Electronic Publication: 2023 Nov 03.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Retrointegration2023-Papers from the 7th International Conference on Retroviral Integration.

Authors: Engelman AN Grandgenett DP Maertens GN et al.

Source: Viruses [Viruses] 2025 Jun 23; Vol. 17 (7). Date of Electronic Publication: 2025 Jun 23.

Publication Type: Editorial; Introductory Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915 (Electronic) Linking ISSN: 19994915 NLM ISO Abbreviation: Viruses Subsets: MEDLINE

CRISPR Genome Editing Applied to the Pathogenic Retrovirus HTLV-1.

Authors: Panfil AR Green PL Yoder KE

Source: Frontiers in cellular and infection microbiology [Front Cell Infect Microbiol] 2020 Dec 23; Vol. 10, pp. 580371. Date of Electronic Publication: 2020 Dec 23 (Print Publication: 2020).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Review

Journal Info: Publisher: Frontiers Media SA Country of Publication: Switzerland NLM ID: 101585359 Publication Model: eCollection Cited Medium: Internet ISSN: 2235-2988 (Electronic) Linking ISSN: 22352988 NLM ISO Abbreviation: Front Cell Infect Microbiol Subsets: MEDLINE

Nucleosome DNA unwrapping does not affect prototype foamy virus integration efficiency or site selection.

Authors: Mackler RM Jones ND Gardner AM et al.

Source: PloS one [PLoS One] 2019 Mar 13; Vol. 14 (3), pp. e0212764. Date of Electronic Publication: 2019 Mar 13 (Print Publication: 2019).

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

A CRISPR/Cas9 library to map the HIV-1 provirus genetic fitness.

Authors: Yoder KE

Source: Acta virologica [Acta Virol] 2019; Vol. 63 (2), pp. 129-138.

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Media S.A Country of Publication: Switzerland NLM ID: 0370401 Publication Model: Print Cited Medium: Print ISSN: 0001-723X (Print) Linking ISSN: 0001723X NLM ISO Abbreviation: Acta Virol

Prototype Foamy Virus Integrase Displays Unique Biochemical Activities among Retroviral Integrases.

Authors: Rabe AJ Tan YY Larue RC et al.

Source: Biomolecules [Biomolecules] 2021 Dec 20; Vol. 11 (12). Date of Electronic Publication: 2021 Dec 20.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101596414 Publication Model: Electronic Cited Medium: Internet ISSN: 2218-273X (Electronic) Linking ISSN: 2218273X NLM ISO Abbreviation: Biomolecules Subsets: MEDLINE

Retroviral intasomes search for a target DNA by 1D diffusion which rarely results in integration.

Authors: Jones ND Lopez MA Jr Hanne J et al.

Source: Nature communications [Nat Commun] 2016 Apr 25; Vol. 7, pp. 11409. Date of Electronic Publication: 2016 Apr 25.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Widespread nuclease contamination in commonly used oxygen-scavenging systems.

Authors: Senavirathne G Liu J Lopez MA Jr et al.

Source: Nature methods [Nat Methods] 2015 Oct; Vol. 12 (10), pp. 901-2.

Publication Type: Letter; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

Strategies for Targeting Retroviral Integration for Safer Gene Therapy: Advances and Challenges.

Authors: Yoder KE Rabe AJ Fishel R et al.

Source: Frontiers in molecular biosciences [Front Mol Biosci] 2021 May 12; Vol. 8, pp. 662331. Date of Electronic Publication: 2021 May 12 (Print Publication: 2021).

Publication Type: Journal Article; Review

Journal Info: Publisher: Frontiers Media S.A Country of Publication: Switzerland NLM ID: 101653173 Publication Model: eCollection Cited Medium: Print ISSN: 2296-889X (Print) Linking ISSN: 2296889X NLM ISO Abbreviation: Front Mol Biosci Subsets: PubMed not MEDLINE

Retroviral prototype foamy virus intasome binding to a nucleosome target does not determine integration efficiency.

Authors: Kotlar RM Jones ND Senavirathne G et al.

Source: The Journal of biological chemistry [J Biol Chem] 2021 Jan-Jun; Vol. 296, pp. 100550. Date of Electronic Publication: 2021 Mar 18.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 2985121R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1083-351X (Electronic) Linking ISSN: 00219258 NLM ISO Abbreviation: J Biol Chem Subsets: MEDLINE

Repair of oxidative DNA base damage in the host genome influences the HIV integration site sequence preference.

Authors: Bennett GR Peters R Wang XH et al.

Source: PloS one [PLoS One] 2014 Jul 22; Vol. 9 (7), pp. e103164. Date of Electronic Publication: 2014 Jul 22 (Print Publication: 2014).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

The base excision repair pathway is required for efficient lentivirus integration.

Authors: Yoder KE Espeseth A Wang XH et al.

Source: PloS one [PLoS One] 2011 Mar 23; Vol. 6 (3), pp. e17862. Date of Electronic Publication: 2011 Mar 23.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: Electronic Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Expression and Purification of Nuclease-Free Oxygen Scavenger Protocatechuate 3,4-Dioxygenase.

Authors: Messer RK Lopez MA Jr Senavirathne G et al.

Source: Journal of visualized experiments : JoVE [J Vis Exp] 2019 Nov 08 (153). Date of Electronic Publication: 2019 Nov 08.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Video-Audio Media

Journal Info: Publisher: MYJoVE Corporation Country of Publication: United States NLM ID: 101313252 Publication Model: Electronic Cited Medium: Internet ISSN: 1940-087X (Electronic) Linking ISSN: 1940087X NLM ISO Abbreviation: J Vis Exp Subsets: MEDLINE

Child assessment of dextromethorphan, diphenhydramine, and placebo for nocturnal cough due to upper respiratory infection.

Authors: Yoder KE Shaffer ML La Tournous SJ et al.

Source: Clinical pediatrics [Clin Pediatr (Phila)] 2006 Sep; Vol. 45 (7), pp. 633-40.

Publication Type: Journal Article; Randomized Controlled Trial; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Sage Publications Country of Publication: United States NLM ID: 0372606 Publication Model: Print Cited Medium: Print ISSN: 0009-9228 (Print) Linking ISSN: 00099228 NLM ISO Abbreviation: Clin Pediatr (Phila) Subsets: MEDLINE

Role of the non-homologous DNA end joining pathway in the early steps of retroviral infection.

Authors: Li L Olvera JM Yoder KE et al.

Source: The EMBO journal [EMBO J] 2001 Jun 15; Vol. 20 (12), pp. 3272-81.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, U.S. Gov't, P.H.S.

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8208664 Publication Model: Print Cited Medium: Print ISSN: 0261-4189 (Print) Linking ISSN: 02614189 NLM ISO Abbreviation: EMBO J Subsets: MEDLINE

Prototype foamy virus intasome aggregation is mediated by outer protein domains and prevented by protocatechuic acid.

Authors: Jones ND Mackler RM Lopez MA Jr et al.

Source: Scientific reports [Sci Rep] 2019 Jan 15; Vol. 9 (1), pp. 132. Date of Electronic Publication: 2019 Jan 15.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

Absence of LEDGF/p75 Expression in Astrocytes May Affect HIV-1 Integration Efficiency.

Authors: Yoder KE; Ohio State University College of Medicine, Columbus, Ohio, 43210 USA.

Source: Molecular genetics, microbiology and virology : Molekulyarnaya genetika, mikrobiologiya i virusologiya [Mol Gen Microbiol Virol] 2019; Vol. 34 (2), pp. 81-83. Date of Electronic Publication: 2019 Oct 14.

Publication Type: Journal Article

Journal Info: Publisher: Allerton Press Country of Publication: United States NLM ID: 8800525 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0891-4168 (Print) Linking ISSN: 08914168 NLM ISO Abbreviation: Mol Gen Microbiol Virol Subsets: PubMed not MEDLINE

CRISPR/Cas9 Genome Editing to Disable the Latent HIV-1 Provirus.

Authors: Panfil AR London JA Green PL et al.

Source: Frontiers in microbiology [Front Microbiol] 2018 Dec 14; Vol. 9, pp. 3107. Date of Electronic Publication: 2018 Dec 14 (Print Publication: 2018).

Publication Type: Journal Article; Review

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE