Integrated phylogenetic analyses reveal the evolutionary, biogeographic, and diversification history of Asian warty treefrog genus Theloderma (Anura, Rhacophoridae).

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Title: Integrated phylogenetic analyses reveal the evolutionary, biogeographic, and diversification history of Asian warty treefrog genus Theloderma (Anura, Rhacophoridae).
Authors: Luo, Tao1,2 (AUTHOR), Zhao, Xin‐Rui2 (AUTHOR), Lan, Chang‐Ting1 (AUTHOR), Li, Wei1 (AUTHOR), Deng, Huai‐Qing1 (AUTHOR), Xiao, Ning3 (AUTHOR), Zhou, Jiang2 (AUTHOR) zhoujiang@ioz.ac.cn
Source: Ecology & Evolution (20457758). Dec2023, Vol. 13 Issue 12, p1-18. 18p.
Subject Terms: *Mountain ecology, *Species diversity, *Biogeography, Rhacophoridae, Hylidae, Asian history, Anura, Principal components analysis
Geographic Terms: China
Abstract: Asian warty treefrogs, genus Theloderma, are morphologically variable arboreal frogs endemic to Southeast Asia and Southern China. However, integrated systematic studies are lacking, and knowledge of the genus in terms of diversity, origin, and historical diversification remains limited. To address these knowledge gaps, we used three mitochondrial and five nuclear gene fragments to reconstruct the Theloderma phylogeny, estimate divergence times, and examine the biogeography of the genus. Phylogenetic and species delimitation analyses suggest that the genus Theloderma comprises three major clades corresponding to two subgenera and seven species groups, and mPTP identified at least 12 putative cryptic species, suggesting that species diversity has been underestimated. Biogeographic analyses indicated that most recent common ancestor of Theloderma originated in the Indochina Peninsula during the Middle Oligocene (ca. 27.77 Ma) and the splitting of Clade A to C occurred in the Late Oligocene (ca. 23.55–25.57 Ma). Current biogeographic patterns result from two distinct processes: in situ diversification in the Indochina Peninsula and dispersal in multiple areas, namely southward dispersal to the Malay Peninsula and Borneo, northeastward dispersal to Southern China, northward dispersal to the Himalayas, and dispersal from Southern China to the Indochina Peninsula. Ancestral character reconstruction suggests that the ancestor of Theloderma may have possessed a small body size, rough dorsal skin, and absence of vomerine teeth and hand webbing, and that these four characters have undergone multiple evolutions. Principal component analysis based on eight bioclimatic variables did not clearly distinguish the three major clades of Theloderma, suggesting that species in these clades may occupy similar climatic ecological niches. Our research highlights the importance of orogeny and paleoclimatic changes, in shaping amphibian biodiversity in mountain ecosystems. [ABSTRACT FROM AUTHOR]
Copyright of Ecology & Evolution (20457758) is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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  Data: Integrated phylogenetic analyses reveal the evolutionary, biogeographic, and diversification history of Asian warty treefrog genus Theloderma (Anura, Rhacophoridae).
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  Data: <searchLink fieldCode="AR" term="%22Luo%2C+Tao%22">Luo, Tao</searchLink><relatesTo>1,2</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Zhao%2C+Xin‐Rui%22">Zhao, Xin‐Rui</searchLink><relatesTo>2</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Lan%2C+Chang‐Ting%22">Lan, Chang‐Ting</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Li%2C+Wei%22">Li, Wei</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Deng%2C+Huai‐Qing%22">Deng, Huai‐Qing</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Xiao%2C+Ning%22">Xiao, Ning</searchLink><relatesTo>3</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Zhou%2C+Jiang%22">Zhou, Jiang</searchLink><relatesTo>2</relatesTo> (AUTHOR)<i> zhoujiang@ioz.ac.cn</i>
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  Data: <searchLink fieldCode="JN" term="%22Ecology+%26+Evolution+%2820457758%29%22">Ecology & Evolution (20457758)</searchLink>. Dec2023, Vol. 13 Issue 12, p1-18. 18p.
– Name: Subject
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  Data: *<searchLink fieldCode="DE" term="%22Mountain+ecology%22">Mountain ecology</searchLink><br />*<searchLink fieldCode="DE" term="%22Species+diversity%22">Species diversity</searchLink><br />*<searchLink fieldCode="DE" term="%22Biogeography%22">Biogeography</searchLink><br /><searchLink fieldCode="DE" term="%22Rhacophoridae%22">Rhacophoridae</searchLink><br /><searchLink fieldCode="DE" term="%22Hylidae%22">Hylidae</searchLink><br /><searchLink fieldCode="DE" term="%22Asian+history%22">Asian history</searchLink><br /><searchLink fieldCode="DE" term="%22Anura%22">Anura</searchLink><br /><searchLink fieldCode="DE" term="%22Principal+components+analysis%22">Principal components analysis</searchLink>
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  Label: Geographic Terms
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  Data: <searchLink fieldCode="DE" term="%22China%22">China</searchLink>
– Name: Abstract
  Label: Abstract
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  Data: Asian warty treefrogs, genus Theloderma, are morphologically variable arboreal frogs endemic to Southeast Asia and Southern China. However, integrated systematic studies are lacking, and knowledge of the genus in terms of diversity, origin, and historical diversification remains limited. To address these knowledge gaps, we used three mitochondrial and five nuclear gene fragments to reconstruct the Theloderma phylogeny, estimate divergence times, and examine the biogeography of the genus. Phylogenetic and species delimitation analyses suggest that the genus Theloderma comprises three major clades corresponding to two subgenera and seven species groups, and mPTP identified at least 12 putative cryptic species, suggesting that species diversity has been underestimated. Biogeographic analyses indicated that most recent common ancestor of Theloderma originated in the Indochina Peninsula during the Middle Oligocene (ca. 27.77 Ma) and the splitting of Clade A to C occurred in the Late Oligocene (ca. 23.55–25.57 Ma). Current biogeographic patterns result from two distinct processes: in situ diversification in the Indochina Peninsula and dispersal in multiple areas, namely southward dispersal to the Malay Peninsula and Borneo, northeastward dispersal to Southern China, northward dispersal to the Himalayas, and dispersal from Southern China to the Indochina Peninsula. Ancestral character reconstruction suggests that the ancestor of Theloderma may have possessed a small body size, rough dorsal skin, and absence of vomerine teeth and hand webbing, and that these four characters have undergone multiple evolutions. Principal component analysis based on eight bioclimatic variables did not clearly distinguish the three major clades of Theloderma, suggesting that species in these clades may occupy similar climatic ecological niches. Our research highlights the importance of orogeny and paleoclimatic changes, in shaping amphibian biodiversity in mountain ecosystems. [ABSTRACT FROM AUTHOR]
– Name: AbstractSuppliedCopyright
  Label:
  Group: Ab
  Data: <i>Copyright of Ecology & Evolution (20457758) is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.)
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      – Type: doi
        Value: 10.1002/ece3.10829
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        PageCount: 18
        StartPage: 1
    Subjects:
      – SubjectFull: Mountain ecology
        Type: general
      – SubjectFull: Species diversity
        Type: general
      – SubjectFull: Biogeography
        Type: general
      – SubjectFull: Rhacophoridae
        Type: general
      – SubjectFull: Hylidae
        Type: general
      – SubjectFull: Asian history
        Type: general
      – SubjectFull: Anura
        Type: general
      – SubjectFull: Principal components analysis
        Type: general
      – SubjectFull: China
        Type: general
    Titles:
      – TitleFull: Integrated phylogenetic analyses reveal the evolutionary, biogeographic, and diversification history of Asian warty treefrog genus Theloderma (Anura, Rhacophoridae).
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            NameFull: Luo, Tao
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            NameFull: Zhao, Xin‐Rui
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            NameFull: Lan, Chang‐Ting
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            NameFull: Li, Wei
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            NameFull: Deng, Huai‐Qing
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            NameFull: Xiao, Ning
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            – D: 01
              M: 12
              Text: Dec2023
              Type: published
              Y: 2023
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            – TitleFull: Ecology & Evolution (20457758)
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