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Pepxmltk-a format converter for peptide identification results obtained from tandem mass spectrometry data using X!Tandem search engine.

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Bibliographic Details
Title: Pepxmltk-a format converter for peptide identification results obtained from tandem mass spectrometry data using X!Tandem search engine.
Authors: Ivanov, M. mike.gorshkov@gmail.com, Levitsky, L., Tarasova, I.1, Gorshkov, M.
Source: Journal of Analytical Chemistry. Dec2015, Vol. 70 Issue 13, p1598-1599. 2p.
Subjects: Command-line interfaces, User interfaces, Peptides, Proteins, XML (Extensible Markup Language)
Abstract: The article describes the development of a command-line interface (CLI) utility pepxmltk, a format converter for peptide identification results. Topics covered include the pepXML format for reporting peptide identification results, limitations of the protein cleavage rules of the pepXML format and the capabilities of pepxmltk.
Database: Engineering Source
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PubType: Academic Journal
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  Data: Pepxmltk-a format converter for peptide identification results obtained from tandem mass spectrometry data using X!Tandem search engine.
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  Data: <searchLink fieldCode="AR" term="%22Ivanov%2C+M%2E%22">Ivanov, M.</searchLink><i> mike.gorshkov@gmail.com</i><br /><searchLink fieldCode="AR" term="%22Levitsky%2C+L%2E%22">Levitsky, L.</searchLink><br /><searchLink fieldCode="AR" term="%22Tarasova%2C+I%2E%22">Tarasova, I.</searchLink><relatesTo>1</relatesTo><br /><searchLink fieldCode="AR" term="%22Gorshkov%2C+M%2E%22">Gorshkov, M.</searchLink>
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  Data: <searchLink fieldCode="JN" term="%22Journal+of+Analytical+Chemistry%22">Journal of Analytical Chemistry</searchLink>. Dec2015, Vol. 70 Issue 13, p1598-1599. 2p.
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  Data: The article describes the development of a command-line interface (CLI) utility pepxmltk, a format converter for peptide identification results. Topics covered include the pepXML format for reporting peptide identification results, limitations of the protein cleavage rules of the pepXML format and the capabilities of pepxmltk.
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=egs&AN=111657565
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        Value: 10.1134/S1061934815130055
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        Text: English
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        Type: general
      – SubjectFull: User interfaces
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      – SubjectFull: Peptides
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      – SubjectFull: Proteins
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      – TitleFull: Pepxmltk-a format converter for peptide identification results obtained from tandem mass spectrometry data using X!Tandem search engine.
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              Text: Dec2015
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