Dissection of complex traits of tomato in the post-genome era.
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| Title: | Dissection of complex traits of tomato in the post-genome era. |
|---|---|
| Authors: | Sun, Shuai1,2 (AUTHOR), Wang, Xiaotian1,2 (AUTHOR), Wang, Ketao1,2 (AUTHOR), Cui, Xia1,2 (AUTHOR) cuixia@caas.cn |
| Source: | Theoretical & Applied Genetics. May2020, Vol. 133 Issue 5, p1763-1776. 14p. |
| Subjects: | Plant mutation, Tomatoes, Molecular cloning, Tomato breeding, Nanotechnology, Gene expression profiling |
| Abstract: | Key message: We present the main advances of dissection of complex traits in tomato by omics, the genes identified to control complex traits and the application of CRISPR/Cas9 in tomato breeding. Complex traits are believed to be under the control of multiple genes, each with different effects and interaction with environmental factors. Advance development of sequencing and molecular technologies has enabled the recognition of the genomic structure of most organisms and the identification of a nearly limitless number of markers that have made it to accelerate the speed of QTL identification and gene cloning. Meanwhile, multiomics have been used to identify the genetic variations among different tomato species, determine the expression profiles of genes in different tissues and at distinct developmental stages, and detect metabolites in different pathways and processes. The combination of these data facilitates to reveal mechanism underlying complex traits. Moreover, mutants generated by mutagens and genome editing provide relatively rich genetic variation for deciphering the complex traits and exploiting them in tomato breeding. In this article, we present the main advances of complex trait dissection in tomato by omics since the release of the tomato genome sequence in 2012. We provide further insight into some tomato complex traits because of the causal genetic variations discovered so far and explore the utilization of CRISPR/Cas9 for the modification of tomato complex traits. [ABSTRACT FROM AUTHOR] |
| Copyright of Theoretical & Applied Genetics is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.) | |
| Database: | Engineering Source |
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| Header | DbId: egs DbLabel: Engineering Source An: 143152546 AccessLevel: 6 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Dissection of complex traits of tomato in the post-genome era. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AR" term="%22Sun%2C+Shuai%22">Sun, Shuai</searchLink><relatesTo>1,2</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Wang%2C+Xiaotian%22">Wang, Xiaotian</searchLink><relatesTo>1,2</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Wang%2C+Ketao%22">Wang, Ketao</searchLink><relatesTo>1,2</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Cui%2C+Xia%22">Cui, Xia</searchLink><relatesTo>1,2</relatesTo> (AUTHOR)<i> cuixia@caas.cn</i> – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22Theoretical+%26+Applied+Genetics%22">Theoretical & Applied Genetics</searchLink>. May2020, Vol. 133 Issue 5, p1763-1776. 14p. – Name: Subject Label: Subjects Group: Su Data: <searchLink fieldCode="DE" term="%22Plant+mutation%22">Plant mutation</searchLink><br /><searchLink fieldCode="DE" term="%22Tomatoes%22">Tomatoes</searchLink><br /><searchLink fieldCode="DE" term="%22Molecular+cloning%22">Molecular cloning</searchLink><br /><searchLink fieldCode="DE" term="%22Tomato+breeding%22">Tomato breeding</searchLink><br /><searchLink fieldCode="DE" term="%22Nanotechnology%22">Nanotechnology</searchLink><br /><searchLink fieldCode="DE" term="%22Gene+expression+profiling%22">Gene expression profiling</searchLink> – Name: Abstract Label: Abstract Group: Ab Data: Key message: We present the main advances of dissection of complex traits in tomato by omics, the genes identified to control complex traits and the application of CRISPR/Cas9 in tomato breeding. Complex traits are believed to be under the control of multiple genes, each with different effects and interaction with environmental factors. Advance development of sequencing and molecular technologies has enabled the recognition of the genomic structure of most organisms and the identification of a nearly limitless number of markers that have made it to accelerate the speed of QTL identification and gene cloning. Meanwhile, multiomics have been used to identify the genetic variations among different tomato species, determine the expression profiles of genes in different tissues and at distinct developmental stages, and detect metabolites in different pathways and processes. The combination of these data facilitates to reveal mechanism underlying complex traits. Moreover, mutants generated by mutagens and genome editing provide relatively rich genetic variation for deciphering the complex traits and exploiting them in tomato breeding. In this article, we present the main advances of complex trait dissection in tomato by omics since the release of the tomato genome sequence in 2012. We provide further insight into some tomato complex traits because of the causal genetic variations discovered so far and explore the utilization of CRISPR/Cas9 for the modification of tomato complex traits. [ABSTRACT FROM AUTHOR] – Name: AbstractSuppliedCopyright Label: Group: Ab Data: <i>Copyright of Theoretical & Applied Genetics is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.) |
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| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1007/s00122-019-03478-y Languages: – Code: eng Text: English PhysicalDescription: Pagination: PageCount: 14 StartPage: 1763 Subjects: – SubjectFull: Plant mutation Type: general – SubjectFull: Tomatoes Type: general – SubjectFull: Molecular cloning Type: general – SubjectFull: Tomato breeding Type: general – SubjectFull: Nanotechnology Type: general – SubjectFull: Gene expression profiling Type: general Titles: – TitleFull: Dissection of complex traits of tomato in the post-genome era. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Sun, Shuai – PersonEntity: Name: NameFull: Wang, Xiaotian – PersonEntity: Name: NameFull: Wang, Ketao – PersonEntity: Name: NameFull: Cui, Xia IsPartOfRelationships: – BibEntity: Dates: – D: 01 M: 05 Text: May2020 Type: published Y: 2020 Identifiers: – Type: issn-print Value: 00405752 Numbering: – Type: volume Value: 133 – Type: issue Value: 5 Titles: – TitleFull: Theoretical & Applied Genetics Type: main |
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