A full saturated linkage map of Picea abies including AFLP, SSR, ESTP, 5S rDNA and morphological markers.
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| Title: | A full saturated linkage map of Picea abies including AFLP, SSR, ESTP, 5S rDNA and morphological markers. |
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| Authors: | Acheré, V.1, Faivre-Rampant, P.1, Jeandroz, S.1, Besnard, G.1, Markussen, T.2, Aragones, A.3, Fladung, M.2, Ritter, E.3, Favre, J.-M.1 Jean-Michel.Favre@scbiol.u-nancy.fr |
| Source: | Theoretical & Applied Genetics. May2004, Vol. 108 Issue 8, p1602-1613. 12p. |
| Subjects: | Genetics, Genomes, Norway spruce, Spruce, Chromosomes, Cell nuclei |
| Abstract: | Based on an F1 progeny of 73 individuals, two parental maps were constructed according to the double pseudo-test cross strategy. The paternal map contained 16 linkage groups for a total genetic length of 1,792 cM. The maternal map covered 1,920 cM, and consisted of 12 linkage groups. These parental maps were then integrated using 66 intercross markers. The resulting consensus map covered 2,035 cM and included 755 markers (661 AFLPs, 74 SSRs, 18 ESTPs, the 5S rDNA and the early cone formation trait) on 12 linkage groups, reflecting the haploid number of chromosomes of Picea abies. The average spacing between two adjacent markers was 2.6 cM. The presence of 39 of the SSR and/or ESTP markers from this consensus map on other published maps of different Picea and Pinus species allowed us to establish partial linkage group homologies across three P. abies maps (up to five common markers per linkage group). This first saturated linkage map of P. abies could be therefore used as a support for developing comparative genome mapping in conifers. [ABSTRACT FROM AUTHOR] |
| Copyright of Theoretical & Applied Genetics is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.) | |
| Database: | Engineering Source |
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| Header | DbId: egs DbLabel: Engineering Source An: 15544114 AccessLevel: 6 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: A full saturated linkage map of Picea abies including AFLP, SSR, ESTP, 5S rDNA and morphological markers. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AR" term="%22Acheré%2C+V%2E%22">Acheré, V.</searchLink><relatesTo>1</relatesTo><br /><searchLink fieldCode="AR" term="%22Faivre-Rampant%2C+P%2E%22">Faivre-Rampant, P.</searchLink><relatesTo>1</relatesTo><br /><searchLink fieldCode="AR" term="%22Jeandroz%2C+S%2E%22">Jeandroz, S.</searchLink><relatesTo>1</relatesTo><br /><searchLink fieldCode="AR" term="%22Besnard%2C+G%2E%22">Besnard, G.</searchLink><relatesTo>1</relatesTo><br /><searchLink fieldCode="AR" term="%22Markussen%2C+T%2E%22">Markussen, T.</searchLink><relatesTo>2</relatesTo><br /><searchLink fieldCode="AR" term="%22Aragones%2C+A%2E%22">Aragones, A.</searchLink><relatesTo>3</relatesTo><br /><searchLink fieldCode="AR" term="%22Fladung%2C+M%2E%22">Fladung, M.</searchLink><relatesTo>2</relatesTo><br /><searchLink fieldCode="AR" term="%22Ritter%2C+E%2E%22">Ritter, E.</searchLink><relatesTo>3</relatesTo><br /><searchLink fieldCode="AR" term="%22Favre%2C+J%2E-M%2E%22">Favre, J.-M.</searchLink><relatesTo>1</relatesTo><i> Jean-Michel.Favre@scbiol.u-nancy.fr</i> – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22Theoretical+%26+Applied+Genetics%22">Theoretical & Applied Genetics</searchLink>. May2004, Vol. 108 Issue 8, p1602-1613. 12p. – Name: Subject Label: Subjects Group: Su Data: <searchLink fieldCode="DE" term="%22Genetics%22">Genetics</searchLink><br /><searchLink fieldCode="DE" term="%22Genomes%22">Genomes</searchLink><br /><searchLink fieldCode="DE" term="%22Norway+spruce%22">Norway spruce</searchLink><br /><searchLink fieldCode="DE" term="%22Spruce%22">Spruce</searchLink><br /><searchLink fieldCode="DE" term="%22Chromosomes%22">Chromosomes</searchLink><br /><searchLink fieldCode="DE" term="%22Cell+nuclei%22">Cell nuclei</searchLink> – Name: Abstract Label: Abstract Group: Ab Data: Based on an F1 progeny of 73 individuals, two parental maps were constructed according to the double pseudo-test cross strategy. The paternal map contained 16 linkage groups for a total genetic length of 1,792 cM. The maternal map covered 1,920 cM, and consisted of 12 linkage groups. These parental maps were then integrated using 66 intercross markers. The resulting consensus map covered 2,035 cM and included 755 markers (661 AFLPs, 74 SSRs, 18 ESTPs, the 5S rDNA and the early cone formation trait) on 12 linkage groups, reflecting the haploid number of chromosomes of Picea abies. The average spacing between two adjacent markers was 2.6 cM. The presence of 39 of the SSR and/or ESTP markers from this consensus map on other published maps of different Picea and Pinus species allowed us to establish partial linkage group homologies across three P. abies maps (up to five common markers per linkage group). This first saturated linkage map of P. abies could be therefore used as a support for developing comparative genome mapping in conifers. [ABSTRACT FROM AUTHOR] – Name: AbstractSuppliedCopyright Label: Group: Ab Data: <i>Copyright of Theoretical & Applied Genetics is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.) |
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| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1007/s00122-004-1587-y Languages: – Code: eng Text: English PhysicalDescription: Pagination: PageCount: 12 StartPage: 1602 Subjects: – SubjectFull: Genetics Type: general – SubjectFull: Genomes Type: general – SubjectFull: Norway spruce Type: general – SubjectFull: Spruce Type: general – SubjectFull: Chromosomes Type: general – SubjectFull: Cell nuclei Type: general Titles: – TitleFull: A full saturated linkage map of Picea abies including AFLP, SSR, ESTP, 5S rDNA and morphological markers. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Acheré, V. – PersonEntity: Name: NameFull: Faivre-Rampant, P. – PersonEntity: Name: NameFull: Jeandroz, S. – PersonEntity: Name: NameFull: Besnard, G. – PersonEntity: Name: NameFull: Markussen, T. – PersonEntity: Name: NameFull: Aragones, A. – PersonEntity: Name: NameFull: Fladung, M. – PersonEntity: Name: NameFull: Ritter, E. – PersonEntity: Name: NameFull: Favre, J.-M. IsPartOfRelationships: – BibEntity: Dates: – D: 15 M: 05 Text: May2004 Type: published Y: 2004 Identifiers: – Type: issn-print Value: 00405752 Numbering: – Type: volume Value: 108 – Type: issue Value: 8 Titles: – TitleFull: Theoretical & Applied Genetics Type: main |
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