Creating a gene-indexed EMS mutation library of Zheng58 for improving maize genetics research.
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| Title: | Creating a gene-indexed EMS mutation library of Zheng58 for improving maize genetics research. |
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| Authors: | Chong, Leelyn1 (AUTHOR), Su, Huihui1 (AUTHOR), Liu, Yingpeng1 (AUTHOR), Zheng, Lingling1 (AUTHOR), Tao, Lianying1 (AUTHOR), Bie, Hai2 (AUTHOR), Xiao, Di1 (AUTHOR), Yang, Yang1 (AUTHOR), Zhang, Wanjun1 (AUTHOR), Zhang, Jing1 (AUTHOR), Ren, Jifei1 (AUTHOR), Liu, Huafeng1 (AUTHOR), Ren, Zhenzhen1 (AUTHOR), Chen, Yanhui1 (AUTHOR), Xi, Zhangying1 (AUTHOR) xizhangying@henau.edu.cn, Li, Chengwei1 (AUTHOR) lcw@henau.edu.cn, Ku, Lixia1 (AUTHOR) kulixia0371@henau.edu.cn |
| Source: | Theoretical & Applied Genetics. Apr2025, Vol. 138 Issue 4, p1-10. 10p. |
| Abstract: | Key message: We created the Zheng58 EMS Mutation Library, which provides a valuable resource for future investigations into the functions and roles of specific genes in maize physiology and development. Understanding the genetic variations present within maize is fundamental to improving maize breeding programs and developing crops with desirable traits. In this work, the Gene-Indexed Ethyl Methanesulfonate (EMS) Mutation Library of Zheng58 in maize was created to accelerate maize genetics research. By chemically inducing mutations in the Zheng58 maize inbred line using (EMS), 426 M2 EMS lines were generated, of which 185 exhibited heritable phenotypic changes. Coupling with high throughput sequencing techniques, over two million mutations, encompassing single nucleotide polymorphisms (SNPs) and small insertions and deletions (InDels), were subsequently identified. Functional annotation of mutation sites further indicated that a significant number of mutations influences important cellular processes, including translation termination (8,279), splice site disruption leading to mis-splicing (9,504), and missense mutations affecting protein-coding sequences (52,494). Therefore, the Gene-Indexed EMS Mutation Library of maize Zheng58 provides a valuable resource for future investigations into the functions and roles of specific genes in maize physiology and development. [ABSTRACT FROM AUTHOR] |
| Copyright of Theoretical & Applied Genetics is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.) | |
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| Header | DbId: egs DbLabel: Engineering Source An: 184114899 AccessLevel: 6 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Creating a gene-indexed EMS mutation library of Zheng58 for improving maize genetics research. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AR" term="%22Chong%2C+Leelyn%22">Chong, Leelyn</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Su%2C+Huihui%22">Su, Huihui</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Liu%2C+Yingpeng%22">Liu, Yingpeng</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Zheng%2C+Lingling%22">Zheng, Lingling</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Tao%2C+Lianying%22">Tao, Lianying</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Bie%2C+Hai%22">Bie, Hai</searchLink><relatesTo>2</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Xiao%2C+Di%22">Xiao, Di</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Yang%2C+Yang%22">Yang, Yang</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Zhang%2C+Wanjun%22">Zhang, Wanjun</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Zhang%2C+Jing%22">Zhang, Jing</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Ren%2C+Jifei%22">Ren, Jifei</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Liu%2C+Huafeng%22">Liu, Huafeng</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Ren%2C+Zhenzhen%22">Ren, Zhenzhen</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Chen%2C+Yanhui%22">Chen, Yanhui</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Xi%2C+Zhangying%22">Xi, Zhangying</searchLink><relatesTo>1</relatesTo> (AUTHOR)<i> xizhangying@henau.edu.cn</i><br /><searchLink fieldCode="AR" term="%22Li%2C+Chengwei%22">Li, Chengwei</searchLink><relatesTo>1</relatesTo> (AUTHOR)<i> lcw@henau.edu.cn</i><br /><searchLink fieldCode="AR" term="%22Ku%2C+Lixia%22">Ku, Lixia</searchLink><relatesTo>1</relatesTo> (AUTHOR)<i> kulixia0371@henau.edu.cn</i> – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22Theoretical+%26+Applied+Genetics%22">Theoretical & Applied Genetics</searchLink>. Apr2025, Vol. 138 Issue 4, p1-10. 10p. – Name: Abstract Label: Abstract Group: Ab Data: Key message: We created the Zheng58 EMS Mutation Library, which provides a valuable resource for future investigations into the functions and roles of specific genes in maize physiology and development. Understanding the genetic variations present within maize is fundamental to improving maize breeding programs and developing crops with desirable traits. In this work, the Gene-Indexed Ethyl Methanesulfonate (EMS) Mutation Library of Zheng58 in maize was created to accelerate maize genetics research. By chemically inducing mutations in the Zheng58 maize inbred line using (EMS), 426 M2 EMS lines were generated, of which 185 exhibited heritable phenotypic changes. Coupling with high throughput sequencing techniques, over two million mutations, encompassing single nucleotide polymorphisms (SNPs) and small insertions and deletions (InDels), were subsequently identified. Functional annotation of mutation sites further indicated that a significant number of mutations influences important cellular processes, including translation termination (8,279), splice site disruption leading to mis-splicing (9,504), and missense mutations affecting protein-coding sequences (52,494). Therefore, the Gene-Indexed EMS Mutation Library of maize Zheng58 provides a valuable resource for future investigations into the functions and roles of specific genes in maize physiology and development. [ABSTRACT FROM AUTHOR] – Name: AbstractSuppliedCopyright Label: Group: Ab Data: <i>Copyright of Theoretical & Applied Genetics is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.) |
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| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1007/s00122-025-04878-z Languages: – Code: eng Text: English PhysicalDescription: Pagination: PageCount: 10 StartPage: 1 Titles: – TitleFull: Creating a gene-indexed EMS mutation library of Zheng58 for improving maize genetics research. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Chong, Leelyn – PersonEntity: Name: NameFull: Su, Huihui – PersonEntity: Name: NameFull: Liu, Yingpeng – PersonEntity: Name: NameFull: Zheng, Lingling – PersonEntity: Name: NameFull: Tao, Lianying – PersonEntity: Name: NameFull: Bie, Hai – PersonEntity: Name: NameFull: Xiao, Di – PersonEntity: Name: NameFull: Yang, Yang – PersonEntity: Name: NameFull: Zhang, Wanjun – PersonEntity: Name: NameFull: Zhang, Jing – PersonEntity: Name: NameFull: Ren, Jifei – PersonEntity: Name: NameFull: Liu, Huafeng – PersonEntity: Name: NameFull: Ren, Zhenzhen – PersonEntity: Name: NameFull: Chen, Yanhui – PersonEntity: Name: NameFull: Xi, Zhangying – PersonEntity: Name: NameFull: Li, Chengwei – PersonEntity: Name: NameFull: Ku, Lixia IsPartOfRelationships: – BibEntity: Dates: – D: 01 M: 04 Text: Apr2025 Type: published Y: 2025 Identifiers: – Type: issn-print Value: 00405752 Numbering: – Type: volume Value: 138 – Type: issue Value: 4 Titles: – TitleFull: Theoretical & Applied Genetics Type: main |
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