Analysis of the Fossilization Processes of Vicarya callosa japonica Shells Using Raman Micro-Mapping Combined with Principal Component Analysis and Partial Least Squares Regression.

Saved in:
Bibliographic Details
Title: Analysis of the Fossilization Processes of Vicarya callosa japonica Shells Using Raman Micro-Mapping Combined with Principal Component Analysis and Partial Least Squares Regression.
Authors: Tanaka, Yuki1 (AUTHOR), Hashimoto, Kosuke2 (AUTHOR), Ichiki, Toshiya3 (AUTHOR), Sato, Hidetoshi3 (AUTHOR), Ozaki, Yukihiro3 (AUTHOR), Tsuboi, Motohiro1 (AUTHOR) tsuboimot@kwansei.ac.jp
Source: Applied Spectroscopy. Aug2025, Vol. 79 Issue 8, p1218-1227. 10p.
Subjects: Fossilization, Raman spectroscopy, Partial least squares regression, Miocene Epoch, Calcite, Principal components analysis, Aragonite, Gastropoda
Abstract: Micro-Raman spectroscopic analysis of a fossil sample of Vicarya callosa japonica was performed to investigate the chemical process of fossilization. The Vicarya sample, originating from the Miocene Katsuta Group, Okayama prefecture, southwestern Japan, had a conical shell body with multiple protuberances on the outer layer. The interior of the shell was filled with a carbonate sediment. Raman mapping combined with principal component analysis (PCA) and partial least squares regression (PLSR) analysis were performed on the sample. Well-preserved, in vivo aragonite was found to be distributed on the shell and near the boundary between the internal carbonate precipitates and the shell. The internal precipitates were composed of pure calcite and black carbonates. The black-colored precipitates contained pyrite, suggesting that the carbonates were derived from the same biogenic tissue as the carbonate concretions and were the starting point for their crystallization. The rapid formation of the precipitates, also similar to that of carbonate concretions, and the suppression of the demineralization effect of the shell from pore water in the sediment may have contributed to the preservation of the aragonite. The reaction of the transition from aragonite to calcite in the shell progressed to some extent and crystallization was completed before the transition to calcite was complete. [ABSTRACT FROM AUTHOR]
Copyright of Applied Spectroscopy is the property of Sage Publications Inc. and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
Database: Engineering Source
FullText Text:
  Availability: 0
Header DbId: egs
DbLabel: Engineering Source
An: 186874189
AccessLevel: 6
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: Analysis of the Fossilization Processes of Vicarya callosa japonica Shells Using Raman Micro-Mapping Combined with Principal Component Analysis and Partial Least Squares Regression.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AR" term="%22Tanaka%2C+Yuki%22">Tanaka, Yuki</searchLink><relatesTo>1</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Hashimoto%2C+Kosuke%22">Hashimoto, Kosuke</searchLink><relatesTo>2</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Ichiki%2C+Toshiya%22">Ichiki, Toshiya</searchLink><relatesTo>3</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Sato%2C+Hidetoshi%22">Sato, Hidetoshi</searchLink><relatesTo>3</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Ozaki%2C+Yukihiro%22">Ozaki, Yukihiro</searchLink><relatesTo>3</relatesTo> (AUTHOR)<br /><searchLink fieldCode="AR" term="%22Tsuboi%2C+Motohiro%22">Tsuboi, Motohiro</searchLink><relatesTo>1</relatesTo> (AUTHOR)<i> tsuboimot@kwansei.ac.jp</i>
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22Applied+Spectroscopy%22">Applied Spectroscopy</searchLink>. Aug2025, Vol. 79 Issue 8, p1218-1227. 10p.
– Name: Subject
  Label: Subjects
  Group: Su
  Data: <searchLink fieldCode="DE" term="%22Fossilization%22">Fossilization</searchLink><br /><searchLink fieldCode="DE" term="%22Raman+spectroscopy%22">Raman spectroscopy</searchLink><br /><searchLink fieldCode="DE" term="%22Partial+least+squares+regression%22">Partial least squares regression</searchLink><br /><searchLink fieldCode="DE" term="%22Miocene+Epoch%22">Miocene Epoch</searchLink><br /><searchLink fieldCode="DE" term="%22Calcite%22">Calcite</searchLink><br /><searchLink fieldCode="DE" term="%22Principal+components+analysis%22">Principal components analysis</searchLink><br /><searchLink fieldCode="DE" term="%22Aragonite%22">Aragonite</searchLink><br /><searchLink fieldCode="DE" term="%22Gastropoda%22">Gastropoda</searchLink>
– Name: Abstract
  Label: Abstract
  Group: Ab
  Data: Micro-Raman spectroscopic analysis of a fossil sample of Vicarya callosa japonica was performed to investigate the chemical process of fossilization. The Vicarya sample, originating from the Miocene Katsuta Group, Okayama prefecture, southwestern Japan, had a conical shell body with multiple protuberances on the outer layer. The interior of the shell was filled with a carbonate sediment. Raman mapping combined with principal component analysis (PCA) and partial least squares regression (PLSR) analysis were performed on the sample. Well-preserved, in vivo aragonite was found to be distributed on the shell and near the boundary between the internal carbonate precipitates and the shell. The internal precipitates were composed of pure calcite and black carbonates. The black-colored precipitates contained pyrite, suggesting that the carbonates were derived from the same biogenic tissue as the carbonate concretions and were the starting point for their crystallization. The rapid formation of the precipitates, also similar to that of carbonate concretions, and the suppression of the demineralization effect of the shell from pore water in the sediment may have contributed to the preservation of the aragonite. The reaction of the transition from aragonite to calcite in the shell progressed to some extent and crystallization was completed before the transition to calcite was complete. [ABSTRACT FROM AUTHOR]
– Name: AbstractSuppliedCopyright
  Label:
  Group: Ab
  Data: <i>Copyright of Applied Spectroscopy is the property of Sage Publications Inc. and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.)
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=egs&AN=186874189
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1177/00037028251322807
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        PageCount: 10
        StartPage: 1218
    Subjects:
      – SubjectFull: Fossilization
        Type: general
      – SubjectFull: Raman spectroscopy
        Type: general
      – SubjectFull: Partial least squares regression
        Type: general
      – SubjectFull: Miocene Epoch
        Type: general
      – SubjectFull: Calcite
        Type: general
      – SubjectFull: Principal components analysis
        Type: general
      – SubjectFull: Aragonite
        Type: general
      – SubjectFull: Gastropoda
        Type: general
    Titles:
      – TitleFull: Analysis of the Fossilization Processes of Vicarya callosa japonica Shells Using Raman Micro-Mapping Combined with Principal Component Analysis and Partial Least Squares Regression.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Tanaka, Yuki
      – PersonEntity:
          Name:
            NameFull: Hashimoto, Kosuke
      – PersonEntity:
          Name:
            NameFull: Ichiki, Toshiya
      – PersonEntity:
          Name:
            NameFull: Sato, Hidetoshi
      – PersonEntity:
          Name:
            NameFull: Ozaki, Yukihiro
      – PersonEntity:
          Name:
            NameFull: Tsuboi, Motohiro
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 01
              M: 08
              Text: Aug2025
              Type: published
              Y: 2025
          Identifiers:
            – Type: issn-print
              Value: 00037028
          Numbering:
            – Type: volume
              Value: 79
            – Type: issue
              Value: 8
          Titles:
            – TitleFull: Applied Spectroscopy
              Type: main
ResultId 1