View in EDS

PAR-CLIP (Photoactivatable Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation): a step-by-step protocol to the transcriptome-wide identification of binding sites of RNA-binding proteins.

Saved in:
Bibliographic Details
Title: PAR-CLIP (Photoactivatable Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation): a step-by-step protocol to the transcriptome-wide identification of binding sites of RNA-binding proteins.
Authors: Spitzer J; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA; These authors contributed equally to this work., Hafner M; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA; These authors contributed equally to this work., Landthaler M; Present address: Berlin Institute for Medical Systems Biology, Max-Delbruck-Center for Molecular Medicine, Berlin, Germany., Ascano M; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA., Farazi T; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA., Wardle G; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA., Nusbaum J; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA., Khorshid M; Biozentrum der Universität Basel and Swiss Institute of Bioinformatics (SIB), Basel, Switzerland., Burger L; Biozentrum der Universität Basel and Swiss Institute of Bioinformatics (SIB), Basel, Switzerland., Zavolan M; Biozentrum der Universität Basel and Swiss Institute of Bioinformatics (SIB), Basel, Switzerland., Tuschl T; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA. Electronic address: ttuschl@rockefeller.edu.
Source: Methods in enzymology [Methods Enzymol] 2014; Vol. 539, pp. 113-61.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 0212271 Publication Model: Print Cited Medium: Internet ISSN: 1557-7988 (Electronic) Linking ISSN: 00766879 NLM ISO Abbreviation: Methods Enzymol Subsets: MEDLINE
Database: MEDLINE Ultimate
FullText Text:
  Availability: 0
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 24581442
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: PAR-CLIP (Photoactivatable Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation): a step-by-step protocol to the transcriptome-wide identification of binding sites of RNA-binding proteins.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Spitzer+J%22">Spitzer J</searchLink>; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA; These authors contributed equally to this work.<br /><searchLink fieldCode="AU" term="%22Hafner+M%22">Hafner M</searchLink>; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA; These authors contributed equally to this work.<br /><searchLink fieldCode="AU" term="%22Landthaler+M%22">Landthaler M</searchLink>; Present address: Berlin Institute for Medical Systems Biology, Max-Delbruck-Center for Molecular Medicine, Berlin, Germany.<br /><searchLink fieldCode="AU" term="%22Ascano+M%22">Ascano M</searchLink>; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Farazi+T%22">Farazi T</searchLink>; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Wardle+G%22">Wardle G</searchLink>; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Nusbaum+J%22">Nusbaum J</searchLink>; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Khorshid+M%22">Khorshid M</searchLink>; Biozentrum der Universität Basel and Swiss Institute of Bioinformatics (SIB), Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Burger+L%22">Burger L</searchLink>; Biozentrum der Universität Basel and Swiss Institute of Bioinformatics (SIB), Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Zavolan+M%22">Zavolan M</searchLink>; Biozentrum der Universität Basel and Swiss Institute of Bioinformatics (SIB), Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Tuschl+T%22">Tuschl T</searchLink>; Howard Hughes Medical Institute, Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY, USA. Electronic address: ttuschl@rockefeller.edu.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%220212271%22">Methods in enzymology</searchLink> [Methods Enzymol] 2014; Vol. 539, pp. 113-61.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article; Research Support, Non-U.S. Gov't
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Academic+Press%22">Academic Press </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>0212271 <i>Publication Model: </i>Print <i>Cited Medium: </i>Internet <i>ISSN: </i>1557-7988 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2200766879%22">00766879 </searchLink><i>NLM ISO Abbreviation: </i>Methods Enzymol <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=24581442
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1016/B978-0-12-420120-0.00008-6
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: 113
    Titles:
      – TitleFull: PAR-CLIP (Photoactivatable Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation): a step-by-step protocol to the transcriptome-wide identification of binding sites of RNA-binding proteins.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Spitzer J
      – PersonEntity:
          Name:
            NameFull: Hafner M
      – PersonEntity:
          Name:
            NameFull: Landthaler M
      – PersonEntity:
          Name:
            NameFull: Ascano M
      – PersonEntity:
          Name:
            NameFull: Farazi T
      – PersonEntity:
          Name:
            NameFull: Wardle G
      – PersonEntity:
          Name:
            NameFull: Nusbaum J
      – PersonEntity:
          Name:
            NameFull: Khorshid M
      – PersonEntity:
          Name:
            NameFull: Burger L
      – PersonEntity:
          Name:
            NameFull: Zavolan M
      – PersonEntity:
          Name:
            NameFull: Tuschl T
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 01
              M: 01
              Text: 2014
              Type: published
              Y: 2014
          Identifiers:
            – Type: issn-electronic
              Value: 1557-7988
          Numbering:
            – Type: volume
              Value: 539
          Titles:
            – TitleFull: Methods in enzymology
              Type: main
ResultId 1