Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
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| Title: | Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data. |
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| Authors: | Bai Y; Department of Biology, Terre Haute, USA. Yongsheng.Bai@indstate.edu.; The Center for Genomic Advocacy, Indiana State University, 600 Chestnut Street, Terre Haute, IN, 47809, USA. Yongsheng.Bai@indstate.edu., Kinne J; Department of Mathematics and Computer Science, Indiana State University, 200 North Seventh Street, Terre Haute, IN, 47809, USA., Donham B; Department of Mathematics and Computer Science, Indiana State University, 200 North Seventh Street, Terre Haute, IN, 47809, USA., Jiang F; Department of Mathematics and Computer Science, Indiana State University, 200 North Seventh Street, Terre Haute, IN, 47809, USA., Ding L; Department of Biology, Terre Haute, USA., Hassler JR; Sanford-Burnham-Prebys Medical Discovery Institute, La Jolla, California, 92037, USA., Kaufman RJ; Sanford-Burnham-Prebys Medical Discovery Institute, La Jolla, California, 92037, USA. |
| Source: | BMC genomics [BMC Genomics] 2016 Aug 22; Vol. 17 Suppl 7, pp. 503. Date of Electronic Publication: 2016 Aug 22. |
| Publication Type: | Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural |
| Journal Info: | Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Links: – Type: pdflink Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 27556805 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Bai+Y%22">Bai Y</searchLink>; Department of Biology, Terre Haute, USA. Yongsheng.Bai@indstate.edu.; The Center for Genomic Advocacy, Indiana State University, 600 Chestnut Street, Terre Haute, IN, 47809, USA. Yongsheng.Bai@indstate.edu.<br /><searchLink fieldCode="AU" term="%22Kinne+J%22">Kinne J</searchLink>; Department of Mathematics and Computer Science, Indiana State University, 200 North Seventh Street, Terre Haute, IN, 47809, USA.<br /><searchLink fieldCode="AU" term="%22Donham+B%22">Donham B</searchLink>; Department of Mathematics and Computer Science, Indiana State University, 200 North Seventh Street, Terre Haute, IN, 47809, USA.<br /><searchLink fieldCode="AU" term="%22Jiang+F%22">Jiang F</searchLink>; Department of Mathematics and Computer Science, Indiana State University, 200 North Seventh Street, Terre Haute, IN, 47809, USA.<br /><searchLink fieldCode="AU" term="%22Ding+L%22">Ding L</searchLink>; Department of Biology, Terre Haute, USA.<br /><searchLink fieldCode="AU" term="%22Hassler+JR%22">Hassler JR</searchLink>; Sanford-Burnham-Prebys Medical Discovery Institute, La Jolla, California, 92037, USA.<br /><searchLink fieldCode="AU" term="%22Kaufman+RJ%22">Kaufman RJ</searchLink>; Sanford-Burnham-Prebys Medical Discovery Institute, La Jolla, California, 92037, USA. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22100965258%22">BMC genomics</searchLink> [BMC Genomics] 2016 Aug 22; Vol. 17 Suppl 7, pp. 503. <i>Date of Electronic Publication: </i>2016 Aug 22. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100965258 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1471-2164 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214712164%22">14712164 </searchLink><i>NLM ISO Abbreviation: </i>BMC Genomics <i>Subsets: </i>MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=27556805 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1186/s12864-016-2896-7 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: 503 Titles: – TitleFull: Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Bai Y – PersonEntity: Name: NameFull: Kinne J – PersonEntity: Name: NameFull: Donham B – PersonEntity: Name: NameFull: Jiang F – PersonEntity: Name: NameFull: Ding L – PersonEntity: Name: NameFull: Hassler JR – PersonEntity: Name: NameFull: Kaufman RJ IsPartOfRelationships: – BibEntity: Dates: – D: 22 M: 08 Text: 2016 Aug 22 Type: published Y: 2016 Identifiers: – Type: issn-electronic Value: 1471-2164 Numbering: – Type: volume Value: 17 Suppl 7 Titles: – TitleFull: BMC genomics Type: main |
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