A differential k-mer analysis pipeline for comparing RNA-Seq transcriptome and meta-transcriptome datasets without a reference.
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| Title: | A differential k-mer analysis pipeline for comparing RNA-Seq transcriptome and meta-transcriptome datasets without a reference. |
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| Authors: | Chan CK; School of Biological Sciences and Institute of Agriculture, The University of Western Australia, Perth, WA, 6009, Australia.; Australian Genome Research Facility, Melbourne, VIC, Australia., Rosic N; School of Health and Human Sciences, Southern Cross University, Gold Coast, QLD, 4225, Australia.; Marine Ecology Research Centre, Southern Cross University, Lismore, NSW, 2480, Australia., Lorenc MT; Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, QLD, 4000, Australia., Visendi P; Natural Resources Institute, University of Greenwich, Chatham Maritime, Kent, ME4 4TB, UK., Lin M; Centre for Integrative Legume Research, School of Agriculture and Food Sciences, The University of Queensland, St. Lucia, QLD, 4067, Australia., Kaniewska P; Global Change Institute, The University of Queensland, St. Lucia, QLD, 4072, Australia., Ferguson BJ; Centre for Integrative Legume Research, School of Agriculture and Food Sciences, The University of Queensland, St. Lucia, QLD, 4067, Australia., Gresshoff PM; Centre for Integrative Legume Research, School of Agriculture and Food Sciences, The University of Queensland, St. Lucia, QLD, 4067, Australia., Batley J; School of Biological Sciences and Institute of Agriculture, The University of Western Australia, Perth, WA, 6009, Australia., Edwards D; School of Biological Sciences and Institute of Agriculture, The University of Western Australia, Perth, WA, 6009, Australia. Dave.Edwards@uwa.edu.au. |
| Source: | Functional & integrative genomics [Funct Integr Genomics] 2019 Mar; Vol. 19 (2), pp. 363-371. Date of Electronic Publication: 2018 Nov 27. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Springer Country of Publication: Germany NLM ID: 100939343 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1438-7948 (Electronic) Linking ISSN: 1438793X NLM ISO Abbreviation: Funct Integr Genomics Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| ISSN: | 1438-7948 |
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| DOI: | 10.1007/s10142-018-0647-3 |
