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Using BEAN-counter to quantify genetic interactions from multiplexed barcode sequencing experiments.

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Title: Using BEAN-counter to quantify genetic interactions from multiplexed barcode sequencing experiments.
Authors: Simpkins SW; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA., Deshpande R; Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN, USA., Nelson J; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA., Li SC; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan., Piotrowski JS; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.; Yumanity Therapeutics, Cambridge, MA, USA., Ward HN; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA., Yashiroda Y; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan., Osada H; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan., Yoshida M; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan., Boone C; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.; Donnelly Centre, University of Toronto, Toronto, ON, Canada., Myers CL; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA. chadm@umn.edu.; Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN, USA. chadm@umn.edu.
Source: Nature protocols [Nat Protoc] 2019 Feb; Vol. 14 (2), pp. 415-440.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101284307 Publication Model: Print Cited Medium: Internet ISSN: 1750-2799 (Electronic) Linking ISSN: 17502799 NLM ISO Abbreviation: Nat Protoc Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Simpkins+SW%22">Simpkins SW</searchLink>; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA.<br /><searchLink fieldCode="AU" term="%22Deshpande+R%22">Deshpande R</searchLink>; Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN, USA.<br /><searchLink fieldCode="AU" term="%22Nelson+J%22">Nelson J</searchLink>; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA.<br /><searchLink fieldCode="AU" term="%22Li+SC%22">Li SC</searchLink>; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.<br /><searchLink fieldCode="AU" term="%22Piotrowski+JS%22">Piotrowski JS</searchLink>; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.; Yumanity Therapeutics, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Ward+HN%22">Ward HN</searchLink>; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA.<br /><searchLink fieldCode="AU" term="%22Yashiroda+Y%22">Yashiroda Y</searchLink>; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.<br /><searchLink fieldCode="AU" term="%22Osada+H%22">Osada H</searchLink>; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.<br /><searchLink fieldCode="AU" term="%22Yoshida+M%22">Yoshida M</searchLink>; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.<br /><searchLink fieldCode="AU" term="%22Boone+C%22">Boone C</searchLink>; RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.; Donnelly Centre, University of Toronto, Toronto, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Myers+CL%22">Myers CL</searchLink>; Bioinformatics and Computational Biology Graduate Program, University of Minnesota Twin Cities, Minneapolis, MN, USA. chadm@umn.edu.; Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN, USA. chadm@umn.edu.
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              Text: 2019 Feb
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