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Analysis of error profiles in deep next-generation sequencing data.

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Title: Analysis of error profiles in deep next-generation sequencing data.
Authors: Ma X; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA. Xiaotu.Ma@stjude.org., Shao Y; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Tian L; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Flasch DA; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Mulder HL; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Edmonson MN; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Liu Y; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Chen X; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Newman S; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Nakitandwe J; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Li Y; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Li B; Key Laboratory of Pediatric Hematology and Oncology Ministry of Health, Department of Hematology and Oncology, Shanghai Children's Medical Center, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, China., Shen S; Key Laboratory of Pediatric Hematology and Oncology Ministry of Health, Department of Hematology and Oncology, Shanghai Children's Medical Center, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, China., Wang Z; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.; Department of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Shurtleff S; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Robison LL; Department of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Levy S; HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA., Easton J; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA., Zhang J; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA. Jinghui.Zhang@stjude.org.
Source: Genome biology [Genome Biol] 2019 Mar 14; Vol. 20 (1), pp. 50. Date of Electronic Publication: 2019 Mar 14.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol
Database: MEDLINE Ultimate
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  Data: Analysis of error profiles in deep next-generation sequencing data.
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  Data: <searchLink fieldCode="AU" term="%22Ma+X%22">Ma X</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA. Xiaotu.Ma@stjude.org.<br /><searchLink fieldCode="AU" term="%22Shao+Y%22">Shao Y</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Tian+L%22">Tian L</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Flasch+DA%22">Flasch DA</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Mulder+HL%22">Mulder HL</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Edmonson+MN%22">Edmonson MN</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Liu+Y%22">Liu Y</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Chen+X%22">Chen X</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Newman+S%22">Newman S</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Nakitandwe+J%22">Nakitandwe J</searchLink>; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Li+Y%22">Li Y</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Li+B%22">Li B</searchLink>; Key Laboratory of Pediatric Hematology and Oncology Ministry of Health, Department of Hematology and Oncology, Shanghai Children's Medical Center, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, China.<br /><searchLink fieldCode="AU" term="%22Shen+S%22">Shen S</searchLink>; Key Laboratory of Pediatric Hematology and Oncology Ministry of Health, Department of Hematology and Oncology, Shanghai Children's Medical Center, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, China.<br /><searchLink fieldCode="AU" term="%22Wang+Z%22">Wang Z</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.; Department of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Shurtleff+S%22">Shurtleff S</searchLink>; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Robison+LL%22">Robison LL</searchLink>; Department of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Levy+S%22">Levy S</searchLink>; HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA.<br /><searchLink fieldCode="AU" term="%22Easton+J%22">Easton J</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+J%22">Zhang J</searchLink>; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA. Jinghui.Zhang@stjude.org.
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  Data: <searchLink fieldCode="JN" term="%22100960660%22">Genome biology</searchLink> [Genome Biol] 2019 Mar 14; Vol. 20 (1), pp. 50. <i>Date of Electronic Publication: </i>2019 Mar 14.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central+Ltd%22">BioMed Central Ltd </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100960660 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1474-760X (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214747596%22">14747596 </searchLink><i>NLM ISO Abbreviation: </i>Genome Biol
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        Value: 10.1186/s13059-019-1659-6
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              Text: 2019 Mar 14
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