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Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods.

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Title: Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods.
Authors: Haas BJ; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA. bhaas@broadinstitute.org., Dobin A; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA., Li B; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Center for Immunology and Inflammatory Diseases, Division of Rheumatology, Allergy, and Immunology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02129, USA., Stransky N; Celsius Therapeutics, Cambridge, MA, 02139, USA., Pochet N; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Ann Romney Center for Neurologic Diseases, Department of Neurology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA., Regev A; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Howard Hughes Medical Institute, and Koch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02140, USA.
Source: Genome biology [Genome Biol] 2019 Oct 21; Vol. 20 (1), pp. 213. Date of Electronic Publication: 2019 Oct 21.
Publication Type: Evaluation Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods.
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  Data: <searchLink fieldCode="AU" term="%22Haas+BJ%22">Haas BJ</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA. bhaas@broadinstitute.org.<br /><searchLink fieldCode="AU" term="%22Dobin+A%22">Dobin A</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.<br /><searchLink fieldCode="AU" term="%22Li+B%22">Li B</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Center for Immunology and Inflammatory Diseases, Division of Rheumatology, Allergy, and Immunology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02129, USA.<br /><searchLink fieldCode="AU" term="%22Stransky+N%22">Stransky N</searchLink>; Celsius Therapeutics, Cambridge, MA, 02139, USA.<br /><searchLink fieldCode="AU" term="%22Pochet+N%22">Pochet N</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Ann Romney Center for Neurologic Diseases, Department of Neurology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA.<br /><searchLink fieldCode="AU" term="%22Regev+A%22">Regev A</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Howard Hughes Medical Institute, and Koch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02140, USA.
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  Data: <searchLink fieldCode="JN" term="%22100960660%22">Genome biology</searchLink> [Genome Biol] 2019 Oct 21; Vol. 20 (1), pp. 213. <i>Date of Electronic Publication: </i>2019 Oct 21.
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        Value: 10.1186/s13059-019-1842-9
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