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High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations.

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Title: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations.
Authors: Zhang Y; Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, 77030, USA., Chen F; Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, 77030, USA., Fonseca NA; European Molecular Biology Laboratory, European Bioinformatics Institute, (EMBL-EBI), Cambridge, UK.; CIBIO/InBIO - Research Center in Biodiversity and Genetic Resources, Universidade do Porto, Vairão, Portugal., He Y; BIOPIC, ICG and College of Life Sciences, Peking University, Beijing, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China., Fujita M; Laboratory for Genome Sequencing Analysis, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan., Nakagawa H; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan., Zhang Z; BIOPIC, ICG and College of Life Sciences, Peking University, Beijing, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China., Brazma A; European Molecular Biology Laboratory, European Bioinformatics Institute, (EMBL-EBI), Cambridge, UK., Creighton CJ; Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, 77030, USA. creighto@bcm.edu.; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA. creighto@bcm.edu.; Department of Medicine, Baylor College of Medicine, Houston, TX, 77030, USA. creighto@bcm.edu.; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA. creighto@bcm.edu.
Corporate Authors: PCAWG Transcriptome Working Group, PCAWG Structural Variation Working Group, PCAWG Consortium
Source: Nature communications [Nat Commun] 2020 Feb 05; Vol. 11 (1), pp. 736. Date of Electronic Publication: 2020 Feb 05.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
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  Data: <searchLink fieldCode="AU" term="%22Zhang+Y%22">Zhang Y</searchLink>; Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, 77030, USA.<br /><searchLink fieldCode="AU" term="%22Chen+F%22">Chen F</searchLink>; Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, 77030, USA.<br /><searchLink fieldCode="AU" term="%22Fonseca+NA%22">Fonseca NA</searchLink>; European Molecular Biology Laboratory, European Bioinformatics Institute, (EMBL-EBI), Cambridge, UK.; CIBIO/InBIO - Research Center in Biodiversity and Genetic Resources, Universidade do Porto, Vairão, Portugal.<br /><searchLink fieldCode="AU" term="%22He+Y%22">He Y</searchLink>; BIOPIC, ICG and College of Life Sciences, Peking University, Beijing, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China.<br /><searchLink fieldCode="AU" term="%22Fujita+M%22">Fujita M</searchLink>; Laboratory for Genome Sequencing Analysis, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan.<br /><searchLink fieldCode="AU" term="%22Nakagawa+H%22">Nakagawa H</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.<br /><searchLink fieldCode="AU" term="%22Zhang+Z%22">Zhang Z</searchLink>; BIOPIC, ICG and College of Life Sciences, Peking University, Beijing, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China.<br /><searchLink fieldCode="AU" term="%22Brazma+A%22">Brazma A</searchLink>; European Molecular Biology Laboratory, European Bioinformatics Institute, (EMBL-EBI), Cambridge, UK.<br /><searchLink fieldCode="AU" term="%22Creighton+CJ%22">Creighton CJ</searchLink>; Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, 77030, USA. creighto@bcm.edu.; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA. creighto@bcm.edu.; Department of Medicine, Baylor College of Medicine, Houston, TX, 77030, USA. creighto@bcm.edu.; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA. creighto@bcm.edu.
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