Characterizing chromatin landscape from aggregate and single-cell genomic assays using flexible duration modeling.

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Title: Characterizing chromatin landscape from aggregate and single-cell genomic assays using flexible duration modeling.
Authors: Gabitto MI; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA. mgabitto@flatironinstitute.org., Rasmussen A; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA., Wapinski O; New York University, Neuroscience Institute and the Department of Neuroscience and Physiology, Smilow Research Center, New York, NY, 10016, USA.; Department of Neurobiology, Harvard Medical School, Boston, MA, 02115, USA.; Stanley Center at the Broad, Cambridge, MA, 02142, USA., Allaway K; New York University, Neuroscience Institute and the Department of Neuroscience and Physiology, Smilow Research Center, New York, NY, 10016, USA.; Department of Neurobiology, Harvard Medical School, Boston, MA, 02115, USA.; Stanley Center at the Broad, Cambridge, MA, 02142, USA., Carriero N; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA.; Scientific Computing Core, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA., Fishell GJ; New York University, Neuroscience Institute and the Department of Neuroscience and Physiology, Smilow Research Center, New York, NY, 10016, USA.; Department of Neurobiology, Harvard Medical School, Boston, MA, 02115, USA.; Stanley Center at the Broad, Cambridge, MA, 02142, USA., Bonneau R; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA. rb133@nyu.edu.; New York University, Center for Data Science, New York, NY, 10010, USA. rb133@nyu.edu.; New York University, Department of Biology, New York, NY, 10012, USA. rb133@nyu.edu.
Source: Nature communications [Nat Commun] 2020 Feb 06; Vol. 11 (1), pp. 747. Date of Electronic Publication: 2020 Feb 06.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Gabitto+MI%22">Gabitto MI</searchLink>; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA. mgabitto@flatironinstitute.org.<br /><searchLink fieldCode="AU" term="%22Rasmussen+A%22">Rasmussen A</searchLink>; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA.<br /><searchLink fieldCode="AU" term="%22Wapinski+O%22">Wapinski O</searchLink>; New York University, Neuroscience Institute and the Department of Neuroscience and Physiology, Smilow Research Center, New York, NY, 10016, USA.; Department of Neurobiology, Harvard Medical School, Boston, MA, 02115, USA.; Stanley Center at the Broad, Cambridge, MA, 02142, USA.<br /><searchLink fieldCode="AU" term="%22Allaway+K%22">Allaway K</searchLink>; New York University, Neuroscience Institute and the Department of Neuroscience and Physiology, Smilow Research Center, New York, NY, 10016, USA.; Department of Neurobiology, Harvard Medical School, Boston, MA, 02115, USA.; Stanley Center at the Broad, Cambridge, MA, 02142, USA.<br /><searchLink fieldCode="AU" term="%22Carriero+N%22">Carriero N</searchLink>; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA.; Scientific Computing Core, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA.<br /><searchLink fieldCode="AU" term="%22Fishell+GJ%22">Fishell GJ</searchLink>; New York University, Neuroscience Institute and the Department of Neuroscience and Physiology, Smilow Research Center, New York, NY, 10016, USA.; Department of Neurobiology, Harvard Medical School, Boston, MA, 02115, USA.; Stanley Center at the Broad, Cambridge, MA, 02142, USA.<br /><searchLink fieldCode="AU" term="%22Bonneau+R%22">Bonneau R</searchLink>; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, 10010, USA. rb133@nyu.edu.; New York University, Center for Data Science, New York, NY, 10010, USA. rb133@nyu.edu.; New York University, Department of Biology, New York, NY, 10012, USA. rb133@nyu.edu.
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