Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.

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Title: Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.
Authors: Hufsky F; Friedrich-Schiller-University Jena, Germany., Lamkiewicz K; Friedrich-Schiller-University Jena, Germany., Almeida A; EMBL-EBI and the Wellcome Sanger Institute, UK., Aouacheria A; CNRS, France., Arighi C; Biocuration and Literature Access at PIR, USA., Bateman A; Protein Sequence Resources at EMBL-EBI, UK., Baumbach J; Technical University of Munich, Germany., Beerenwinkel N; Computational Biology at ETH Zurich, Switzerland., Brandt C; Institute of Infectious Disease and Infection Control at Jena University Hospital, Germany., Cacciabue M; Consejo Nacional de Investigaciones Científicas y Tócnicas (CONICET) working on FMDV virology at the Instituto de Agrobiotecnología y Biología Molecular (IABiMo, INTA-CONICET) and at the Departamento de Ciencias Básicas, Universidad Nacional de Luján (UNLu), Argentina., Chuguransky S; Pfam and InterPro databases, at the EMBL-EBI, UK., Drechsel O; bioinformatics department at the Robert Koch-Institute, Germany., Finn RD; Pfam and MGnify., Fritz A; Computational Biology of Infection Research group of Alice C. McHardy at the Helmholtz Centre for Infection Research, Germany., Fuchs S; bioinformatics department at the Robert Koch-Institute, Germany., Hattab G; Bioinformatics Division at Philipps-University Marburg, Germany., Hauschild AC; Philipps-University Marburg, Germany., Heider D; Data Science in Biomedicine at the Philipps-University of Marburg, Germany., Hoffmann M; Freie Universität Berlin, Germany., Hölzer M; Friedrich Schiller University Jena, Germany., Hoops S; Biocomplexity Institute and Initiative at the University of Virginia, USA., Kaderali L; Bioinformatics and head of the Institute of Bioinformatics at University Medicine Greifswald, Germany., Kalvari I; Senior Software Developer., von Kleist M; bioinformatics department at the Robert Koch-Institute, Germany., Kmiecinski R; bioinformatics department at the Robert Koch-Institute, Germany., Kühnert D; Max Planck Institute for the Science of Human History., Lasso G; Chandran Lab, Albert Einstein College of Medicine, USA., Libin P; University of Hasselt, Belgium., List M; Technical University of Munich, Germany., Löchel HF; Philipps-University Marburg, Germany., Martin MJ; EMBL-EBI, UK., Martin R; Philipps-University Marburg, Germany., Matschinske J; Chair of Experimental Bioinformatics at TU Munich, Germany., McHardy AC; Computational Biology of Infection Research Lab at the Helmholtz Centre for Infection Research in Braunschweig, Germany., Mendes P; Center for Quantitative Medicine of the University of Connecticut School of Medicine, USA., Mistry J; EMBL-EBI, UK., Navratil V; Bioinformatics and Systems Biology at the Rhône Alpes Bioinformatics core facility, Universitó de Lyon, France., Nawrocki EP; National Center for Biotechnology Information (NCBI)., O'Toole ÁN; Rambaut group at Edinburgh University, UK., Ontiveros-Palacios N; EMBL-EBI, UK., Petrov AI; EMBL-EBI, UK., Rangel-Pineros G; GLOBE Institute in the University of Copenhagen, Denmark., Redaschi N; Development of the Swiss-Prot group at the SIB for UniProt and SIB resources that cover viral biology (ViralZone)., Reimering S; Computational Biology of Infection Research group of Alice C. McHardy at the Helmholtz Centre for Infection Research., Reinert K; Freie Universität Berlin, Germany., Reyes A; Universidad de los Andes, Colombia., Richardson L; Sequence Families team at EMBL-EBI, UK., Robertson DL; MRC-University of Glasgow Centre for Virus Research, UK., Sadegh S; Chair of Experimental Bioinformatics at Technical University of Munich, Germany., Singer JB; MRC-University of Glasgow Centre for Virus Research, Glasgow, Scotland, UK., Theys K; Rega institute of the University of Leuven, Belgium., Upton C; Department of Biochemistry and Microbiology, University of Victoria, Canada., Welzel M; Philipps-University Marburg, Germany., Williams L; Pfam and InterPro databases, at EMBL-EBI, UK., Marz M; Friedrich Schiller University Jena, Germany.
Source: Briefings in bioinformatics [Brief Bioinform] 2021 Mar 22; Vol. 22 (2), pp. 642-663.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't; Review
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief Bioinform Subsets: MEDLINE
Database: MEDLINE Ultimate
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