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Reconstruction of ancient microbial genomes from the human gut.

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Title: Reconstruction of ancient microbial genomes from the human gut.
Authors: Wibowo MC; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA.; Department of Microbiology, Harvard Medical School, Boston, MA, USA., Yang Z; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA.; Department of Microbiology, Harvard Medical School, Boston, MA, USA.; Department of Combinatorics and Optimization, University of Waterloo, Waterloo, Ontario, Canada., Borry M; Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany., Hübner A; Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany., Huang KD; CIBIO Department, University of Trento, Trento, Italy.; Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy., Tierney BT; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA.; Department of Microbiology, Harvard Medical School, Boston, MA, USA.; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA., Zimmerman S; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA.; Department of Microbiology, Harvard Medical School, Boston, MA, USA., Barajas-Olmos F; Immunogenomics and Metabolic Diseases Laboratory, Secretaría de Salud, Instituto Nacional de Medicina Genómica, Mexico City, Mexico., Contreras-Cubas C; Immunogenomics and Metabolic Diseases Laboratory, Secretaría de Salud, Instituto Nacional de Medicina Genómica, Mexico City, Mexico., García-Ortiz H; Immunogenomics and Metabolic Diseases Laboratory, Secretaría de Salud, Instituto Nacional de Medicina Genómica, Mexico City, Mexico., Martínez-Hernández A; Immunogenomics and Metabolic Diseases Laboratory, Secretaría de Salud, Instituto Nacional de Medicina Genómica, Mexico City, Mexico., Luber JM; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA.; Department of Microbiology, Harvard Medical School, Boston, MA, USA.; Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Kirstahler P; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kongens Lyngby, Denmark., Blohm T; Department of Anthropology, University of Montana, Missoula, MT, USA., Smiley FE; Department of Anthropology, Northern Arizona University, Flagstaff, AZ, USA., Arnold R; Pahrump Paiute Tribe and Consolidated Group of Tribes and Organizations, Pahrump, NV, USA., Ballal SA; Department of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston, MA, USA., Pamp SJ; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kongens Lyngby, Denmark., Russ J; Morrison Microscopy Core Research Facility, Center for Biotechnology, University of Nebraska-Lincoln, Lincoln, NE, USA., Maixner F; Institute for Mummy Studies, EURAC Research, Bolzano, Italy., Rota-Stabelli O; Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy.; Center Agriculture Food Environment (C3A), University of Trento, Trento, Italy., Segata N; CIBIO Department, University of Trento, Trento, Italy., Reinhard K; School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, USA., Orozco L; Immunogenomics and Metabolic Diseases Laboratory, Secretaría de Salud, Instituto Nacional de Medicina Genómica, Mexico City, Mexico., Warinner C; Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany.; Department of Anthropology, Harvard University, Cambridge, MA, USA.; Faculty of Biological Sciences, Friedrich-Schiller University, Jena, Germany., Snow M; Department of Anthropology, University of Montana, Missoula, MT, USA., LeBlanc S; Peabody Museum of Archaeology and Ethnology, Harvard University, Cambridge, MA, USA., Kostic AD; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA. aleksandar.kostic@joslin.harvard.edu.; Department of Microbiology, Harvard Medical School, Boston, MA, USA. aleksandar.kostic@joslin.harvard.edu.
Source: Nature [Nature] 2021 Jun; Vol. 594 (7862), pp. 234-239. Date of Electronic Publication: 2021 May 12.
Publication Type: Historical Article; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE
Database: MEDLINE Ultimate
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CIBIO Department, University of Trento, Trento, Italy.; Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy.<br /><searchLink fieldCode="AU" term="%22Tierney+BT%22">Tierney BT</searchLink>; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA.; Department of Microbiology, Harvard Medical School, Boston, MA, USA.; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Zimmerman+S%22">Zimmerman S</searchLink>; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA.; Department of Microbiology, Harvard Medical School, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Barajas-Olmos+F%22">Barajas-Olmos F</searchLink>; Immunogenomics and Metabolic Diseases Laboratory, Secretaría de Salud, Instituto Nacional de Medicina Genómica, Mexico City, Mexico.<br /><searchLink fieldCode="AU" term="%22Contreras-Cubas+C%22">Contreras-Cubas C</searchLink>; 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Morrison Microscopy Core Research Facility, Center for Biotechnology, University of Nebraska-Lincoln, Lincoln, NE, USA.<br /><searchLink fieldCode="AU" term="%22Maixner+F%22">Maixner F</searchLink>; Institute for Mummy Studies, EURAC Research, Bolzano, Italy.<br /><searchLink fieldCode="AU" term="%22Rota-Stabelli+O%22">Rota-Stabelli O</searchLink>; Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy.; Center Agriculture Food Environment (C3A), University of Trento, Trento, Italy.<br /><searchLink fieldCode="AU" term="%22Segata+N%22">Segata N</searchLink>; CIBIO Department, University of Trento, Trento, Italy.<br /><searchLink fieldCode="AU" term="%22Reinhard+K%22">Reinhard K</searchLink>; School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, USA.<br /><searchLink fieldCode="AU" term="%22Orozco+L%22">Orozco L</searchLink>; Immunogenomics and Metabolic Diseases Laboratory, Secretaría de Salud, Instituto Nacional de Medicina Genómica, Mexico City, Mexico.<br /><searchLink fieldCode="AU" term="%22Warinner+C%22">Warinner C</searchLink>; Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany.; Department of Anthropology, Harvard University, Cambridge, MA, USA.; Faculty of Biological Sciences, Friedrich-Schiller University, Jena, Germany.<br /><searchLink fieldCode="AU" term="%22Snow+M%22">Snow M</searchLink>; Department of Anthropology, University of Montana, Missoula, MT, USA.<br /><searchLink fieldCode="AU" term="%22LeBlanc+S%22">LeBlanc S</searchLink>; Peabody Museum of Archaeology and Ethnology, Harvard University, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Kostic+AD%22">Kostic AD</searchLink>; Section on Pathophysiology and Molecular Pharmacology, Joslin Diabetes Center, Boston, MA, USA. aleksandar.kostic@joslin.harvard.edu.; Department of Microbiology, Harvard Medical School, Boston, MA, USA. aleksandar.kostic@joslin.harvard.edu.
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